Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL1P09341 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL1P09341 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.25□□□□□ -1.73
CXCL1P09341 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 PCNPP4-201ENST00000414817 517 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL1P09341 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL1P09341 AC023141.8-201ENST00000442554 208 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL1P09341 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL1P09341 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 AL445466.1-201ENST00000448432 357 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL1P09341 RN7SL502P-201ENST00000481857 290 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL1P09341 SNX18P25-201ENST00000510539 758 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL1P09341 RNU6-1334P-201ENST00000516032 105 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 RNA5SP303-201ENST00000516192 130 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL1P09341 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.25□□□□□ -1.73
CXCL1P09341 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.25□□□□□ -1.73
CXCL1P09341 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.25□□□□□ -1.73
CXCL1P09341 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 MIR4732-201ENST00000581873 76 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.25□□□□□ -1.73
CXCL1P09341 AC107993.1-201ENST00000591343 684 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 AL390877.1-201ENST00000605704 214 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL1P09341 AL365181.4-201ENST00000609800 547 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL1P09341 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL1P09341 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 AC008079.2-201ENST00000623543 20396 ntBASIC4.25□□□□□ -1.73
CXCL1P09341 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CXCL1P09341 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CXCL1P09341 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 MIR138-2-201ENST00000384916 84 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 RN7SKP16-201ENST00000410180 299 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 RN7SKP199-201ENST00000410325 305 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 RNA5SP198-201ENST00000410376 127 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.24□□□□□ -1.73
CXCL1P09341 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 DEFA9P-201ENST00000433042 285 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 WDR82P2-201ENST00000444540 928 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 BTF3P6-201ENST00000448054 499 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 TREML3P-201ENST00000457327 501 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 RPS23P2-201ENST00000463671 415 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CXCL1P09341 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.24□□□□□ -1.73
CXCL1P09341 AC117500.1-201ENST00000497352 755 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 ARL4AP1-201ENST00000503220 705 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.24□□□□□ -1.73
CXCL1P09341 HMGB1P19-201ENST00000517578 577 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.24□□□□□ -1.73
CXCL1P09341 AC090022.1-201ENST00000546569 311 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.24□□□□□ -1.73
CXCL1P09341 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.24□□□□□ -1.73
CXCL1P09341 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.24□□□□□ -1.73
CXCL1P09341 AC083964.1-201ENST00000607549 630 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 AL080312.2-201ENST00000613001 630 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 AC018717.1-201ENST00000457712 1505 ntBASIC4.24□□□□□ -1.73
CXCL1P09341 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.24□□□□□ -1.73
CXCL1P09341 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.24□□□□□ -1.73
CXCL1P09341 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL1P09341 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.24□□□□□ -1.73
CXCL1P09341 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CXCL1P09341 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CXCL1P09341 AL162456.1-201ENST00000634535 2006 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CXCL1P09341 SELENOWP1-201ENST00000322792 252 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 RNU1-134P-201ENST00000362935 165 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms