Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AGGF1P7-201ENST00000562369 913 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC106730.2-201ENST00000566641 540 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AL359715.3-201ENST00000569267 2123 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC079315.1-201ENST00000602952 623 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AL138895.2-201ENST00000603019 178 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AL136131.3-201ENST00000607600 188 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 OR51C1P-201ENST00000608504 942 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 uc_338.7-201ENST00000621834 124 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 AC027088.4-201ENST00000611559 1947 ntBASIC5.01□□□□□ -1.61
HLA-DPB1P04440 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPB1P04440 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DPB1P04440 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DPB1P04440 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
HLA-DPB1P04440 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DPB1P04440 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 AC003985.2-201ENST00000562268 1669 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AC026523.2-201ENST00000625039 7739 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 RN7SKP275-201ENST00000364626 301 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 MIR130A-201ENST00000385274 89 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 SNORA48.4-201ENST00000391089 134 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AC016739.1-201ENST00000405359 345 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DPB1P04440 BX323845.3-201ENST00000428215 527 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AC126120.1-201ENST00000431082 470 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 VN1R110P-201ENST00000438988 971 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 NANOGP9-201ENST00000439890 892 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 IGBP1P3-201ENST00000447449 1000 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPB1P04440 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DPB1P04440 AC093166.4-201ENST00000457867 318 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 ACA64.1-201ENST00000459171 127 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AP000797.2-201ENST00000475768 606 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 USP9YP2-201ENST00000504503 1000 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 USP9YP1-201ENST00000513521 1002 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPB1P04440 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPB1P04440 IGLV3-24-201ENST00000517477 197 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 IGLV3-30-201ENST00000524362 298 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DPB1P04440 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPB1P04440 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5□□□□□ -1.61
HLA-DPB1P04440 RN7SL290P-201ENST00000578661 300 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AC125494.2-201ENST00000602431 657 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AC067773.1-201ENST00000603284 1094 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 FAM27E4-201ENST00000605259 342 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 Xist_exon4.1-201ENST00000615964 126 ntBASIC5□□□□□ -1.61
HLA-DPB1P04440 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DPB1P04440 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPB1P04440 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HLA-DPB1P04440 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPB1P04440 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 MIR621-201ENST00000384919 96 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 RN7SKP29-201ENST00000410957 272 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 DNAJA1P5-201ENST00000440278 943 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 SERPINA7P1-201ENST00000443077 631 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms