Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.68□□□□□ -1.5
LDLRP01130 AC023141.3-201ENST00000436698 278 ntBASIC5.68□□□□□ -1.5
LDLRP01130 AL353662.1-201ENST00000439099 327 ntBASIC5.68□□□□□ -1.5
LDLRP01130 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LDLRP01130 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.68□□□□□ -1.5
LDLRP01130 AC073072.2-201ENST00000447425 348 ntBASIC5.68□□□□□ -1.5
LDLRP01130 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.68□□□□□ -1.5
LDLRP01130 AL049829.1-201ENST00000465411 156 ntBASIC5.68□□□□□ -1.5
LDLRP01130 RPSAP39-201ENST00000467439 883 ntBASIC5.68□□□□□ -1.5
LDLRP01130 RN7SL643P-201ENST00000471845 291 ntBASIC5.68□□□□□ -1.5
LDLRP01130 AC079080.1-201ENST00000479841 822 ntBASIC5.68□□□□□ -1.5
LDLRP01130 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.68□□□□□ -1.5
LDLRP01130 CCDC11P1-201ENST00000503137 1162 ntBASIC5.68□□□□□ -1.5
LDLRP01130 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.68□□□□□ -1.5
LDLRP01130 Y_RNA.667-201ENST00000516212 107 ntBASIC5.68□□□□□ -1.5
LDLRP01130 RNU6-943P-201ENST00000516960 98 ntBASIC5.68□□□□□ -1.5
LDLRP01130 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.68□□□□□ -1.5
LDLRP01130 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.68□□□□□ -1.5
LDLRP01130 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LDLRP01130 ZNF322P1-201ENST00000568013 1209 ntBASIC5.68□□□□□ -1.5
LDLRP01130 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.68□□□□□ -1.5
LDLRP01130 RN7SL475P-201ENST00000583379 298 ntBASIC5.68□□□□□ -1.5
LDLRP01130 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.68□□□□□ -1.5
LDLRP01130 AC006115.2-201ENST00000596823 202 ntBASIC5.68□□□□□ -1.5
LDLRP01130 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.68□□□□□ -1.5
LDLRP01130 AC092953.2-201ENST00000608000 699 ntBASIC5.68□□□□□ -1.5
LDLRP01130 MIR6730-201ENST00000622213 67 ntBASIC5.68□□□□□ -1.5
LDLRP01130 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LDLRP01130 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.68□□□□□ -1.5
LDLRP01130 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
LDLRP01130 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LDLRP01130 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.68□□□□□ -1.5
LDLRP01130 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
LDLRP01130 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.68□□□□□ -1.5
LDLRP01130 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LDLRP01130 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LDLRP01130 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.68□□□□□ -1.5
LDLRP01130 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
LDLRP01130 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LDLRP01130 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.67□□□□□ -1.5
LDLRP01130 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 AC093671.1-201ENST00000624981 2929 ntBASIC5.67□□□□□ -1.5
LDLRP01130 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LDLRP01130 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 Y_RNA.62-201ENST00000362840 99 ntBASIC5.67□□□□□ -1.5
LDLRP01130 MIR143-201ENST00000385300 106 ntBASIC5.67□□□□□ -1.5
LDLRP01130 CBX1P3-201ENST00000413296 527 ntBASIC5.67□□□□□ -1.5
LDLRP01130 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 TRIM60P13-201ENST00000432350 1283 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AC099670.2-201ENST00000435130 321 ntBASIC5.67□□□□□ -1.5
LDLRP01130 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 SOCS5P1-201ENST00000440415 949 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.67□□□□□ -1.5
LDLRP01130 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.67□□□□□ -1.5
LDLRP01130 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 THAP12P8-201ENST00000447914 2115 ntBASIC5.67□□□□□ -1.5
LDLRP01130 CFL1P4-201ENST00000451536 498 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AL513343.1-201ENST00000451818 792 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.67□□□□□ -1.5
LDLRP01130 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 TMEM97P2-201ENST00000517841 403 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.67□□□□□ -1.5
LDLRP01130 AP003168.1-201ENST00000530091 307 ntBASIC5.67□□□□□ -1.5
LDLRP01130 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.67□□□□□ -1.5
LDLRP01130 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.67□□□□□ -1.5
LDLRP01130 AC009268.1-201ENST00000561352 1203 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AC073333.2-201ENST00000603589 769 ntBASIC5.67□□□□□ -1.5
LDLRP01130 AL162574.2-201ENST00000614618 657 ntBASIC5.67□□□□□ -1.5
LDLRP01130 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 AC245014.3-201ENST00000618589 347 ntBASIC5.67□□□□□ -1.5
LDLRP01130 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 AC024587.1-201ENST00000505925 2157 ntBASIC5.67□□□□□ -1.5
LDLRP01130 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 AC016745.2-201ENST00000608834 3443 ntBASIC5.67□□□□□ -1.5
LDLRP01130 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.67□□□□□ -1.5
LDLRP01130 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LDLRP01130 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LDLRP01130 THAP12P9-201ENST00000503971 2360 ntBASIC5.66□□□□□ -1.5
LDLRP01130 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LDLRP01130 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 AC015689.2-201ENST00000528172 1738 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AL513548.1-201ENST00000562904 1724 ntBASIC5.66□□□□□ -1.5
LDLRP01130 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms