Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.81□□□□□ -1.32
MBD4O95243 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.81□□□□□ -1.32
MBD4O95243 QTRT1P1-201ENST00000604344 1078 ntBASIC6.81□□□□□ -1.32
MBD4O95243 AL133481.2-203ENST00000607558 139 ntBASIC6.81□□□□□ -1.32
MBD4O95243 AL035661.1-201ENST00000620459 1144 ntBASIC6.81□□□□□ -1.32
MBD4O95243 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.81□□□□□ -1.32
MBD4O95243 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
MBD4O95243 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.81□□□□□ -1.32
MBD4O95243 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.81□□□□□ -1.32
MBD4O95243 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 AL591135.1-201ENST00000401578 5914 ntBASIC6.81□□□□□ -1.32
MBD4O95243 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.8□□□□□ -1.32
MBD4O95243 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.8□□□□□ -1.32
MBD4O95243 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 AC083837.1-201ENST00000565297 2994 ntBASIC6.8□□□□□ -1.32
MBD4O95243 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 U3.25-201ENST00000391209 220 ntBASIC6.8□□□□□ -1.32
MBD4O95243 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.8□□□□□ -1.32
MBD4O95243 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.8□□□□□ -1.32
MBD4O95243 AC079355.1-201ENST00000421770 223 ntBASIC6.8□□□□□ -1.32
MBD4O95243 AC006335.2-201ENST00000437993 330 ntBASIC6.8□□□□□ -1.32
MBD4O95243 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.8□□□□□ -1.32
MBD4O95243 RAD1P2-201ENST00000446414 663 ntBASIC6.8□□□□□ -1.32
MBD4O95243 AP000547.1-201ENST00000454360 617 ntBASIC6.8□□□□□ -1.32
MBD4O95243 DUTP7-201ENST00000507982 486 ntBASIC6.8□□□□□ -1.32
MBD4O95243 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.8□□□□□ -1.32
MBD4O95243 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
MBD4O95243 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
MBD4O95243 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.8□□□□□ -1.32
MBD4O95243 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.8□□□□□ -1.32
MBD4O95243 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.8□□□□□ -1.32
MBD4O95243 AL163952.1-202ENST00000569625 600 ntBASIC6.8□□□□□ -1.32
MBD4O95243 AC020656.2-201ENST00000613291 5309 ntBASIC6.8□□□□□ -1.32
MBD4O95243 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
MBD4O95243 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.8□□□□□ -1.32
MBD4O95243 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.8□□□□□ -1.32
MBD4O95243 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.8□□□□□ -1.32
MBD4O95243 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MBD4O95243 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.8□□□□□ -1.32
MBD4O95243 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 AL359955.1-201ENST00000455242 3275 ntBASIC6.79□□□□□ -1.32
MBD4O95243 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.79□□□□□ -1.32
MBD4O95243 PWAR1-201ENST00000624188 2414 ntBASIC6.79□□□□□ -1.32
MBD4O95243 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 AC092111.2-201ENST00000611627 1414 ntBASIC6.79□□□□□ -1.32
MBD4O95243 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MBD4O95243 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.79□□□□□ -1.32
MBD4O95243 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.79□□□□□ -1.32
MBD4O95243 TNPO1P1-201ENST00000423641 1138 ntBASIC6.79□□□□□ -1.32
MBD4O95243 VN1R21P-201ENST00000426703 765 ntBASIC6.79□□□□□ -1.32
MBD4O95243 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.79□□□□□ -1.32
MBD4O95243 RPL12P16-201ENST00000431098 498 ntBASIC6.79□□□□□ -1.32
MBD4O95243 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.79□□□□□ -1.32
MBD4O95243 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.79□□□□□ -1.32
MBD4O95243 RPS7P6-201ENST00000485777 579 ntBASIC6.79□□□□□ -1.32
MBD4O95243 RN7SL284P-201ENST00000498823 275 ntBASIC6.79□□□□□ -1.32
MBD4O95243 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.79□□□□□ -1.32
MBD4O95243 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.79□□□□□ -1.32
MBD4O95243 IGLV3-24-201ENST00000517477 197 ntBASIC6.79□□□□□ -1.32
MBD4O95243 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.79□□□□□ -1.32
MBD4O95243 AC139697.1-201ENST00000548429 745 ntBASIC6.79□□□□□ -1.32
MBD4O95243 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.79□□□□□ -1.32
MBD4O95243 AGGF1P7-201ENST00000562369 913 ntBASIC6.79□□□□□ -1.32
MBD4O95243 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.79□□□□□ -1.32
MBD4O95243 MIR1273E-201ENST00000581165 102 ntBASIC6.79□□□□□ -1.32
MBD4O95243 AC090953.1-201ENST00000604305 1092 ntBASIC6.79□□□□□ -1.32
MBD4O95243 BNIP3P7-201ENST00000605641 516 ntBASIC6.79□□□□□ -1.32
MBD4O95243 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.79□□□□□ -1.32
MBD4O95243 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
MBD4O95243 AL049767.1-202ENST00000637826 242 ntBASIC6.79□□□□□ -1.32
MBD4O95243 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
MBD4O95243 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.79□□□□□ -1.32
MBD4O95243 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MBD4O95243 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.79□□□□□ -1.32
MBD4O95243 AC123769.1-201ENST00000530992 3192 ntBASIC6.79□□□□□ -1.32
MBD4O95243 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
MBD4O95243 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms