Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC073869.8-201ENST00000641806 335 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.43□□□□□ -1.7
SSSCA1O60232 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.42□□□□□ -1.7
SSSCA1O60232 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SSSCA1O60232 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSSCA1O60232 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.42□□□□□ -1.7
SSSCA1O60232 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.42□□□□□ -1.7
SSSCA1O60232 RN7SKP146-201ENST00000410242 334 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 NENFP1-201ENST00000419476 466 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.42□□□□□ -1.7
SSSCA1O60232 LINC00328-2P-201ENST00000436585 219 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.42□□□□□ -1.7
SSSCA1O60232 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.42□□□□□ -1.7
SSSCA1O60232 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.42□□□□□ -1.7
SSSCA1O60232 RPL36AP55-201ENST00000454114 305 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.42□□□□□ -1.7
SSSCA1O60232 RPS12P31-201ENST00000491419 398 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.42□□□□□ -1.7
SSSCA1O60232 AP003396.4-201ENST00000527574 265 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 PCNAP4-201ENST00000532690 730 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.42□□□□□ -1.7
SSSCA1O60232 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.42□□□□□ -1.7
SSSCA1O60232 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 AP000769.2-201ENST00000602344 396 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.42□□□□□ -1.7
SSSCA1O60232 AC023632.6-201ENST00000624338 2177 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 AC010266.2-201ENST00000564741 3255 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SSSCA1O60232 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.42□□□□□ -1.7
SSSCA1O60232 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.42□□□□□ -1.7
SSSCA1O60232 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSSCA1O60232 AC093591.2-201ENST00000565254 3843 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 AL731532.2-201ENST00000623542 1953 ntBASIC4.42□□□□□ -1.7
SSSCA1O60232 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSSCA1O60232 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.41□□□□□ -1.7
SSSCA1O60232 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSSCA1O60232 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSSCA1O60232 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSSCA1O60232 AL603750.1-201ENST00000624216 1717 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSSCA1O60232 AC017079.1-201ENST00000333650 415 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 MIR130B-202ENST00000385018 82 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AL133260.1-201ENST00000405720 405 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AC017078.1-201ENST00000416146 368 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SSSCA1O60232 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.41□□□□□ -1.7
SSSCA1O60232 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.41□□□□□ -1.7
SSSCA1O60232 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSSCA1O60232 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSSCA1O60232 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.41□□□□□ -1.7
SSSCA1O60232 RN7SL72P-201ENST00000460697 269 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AL122020.1-201ENST00000472287 459 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 RPS4XP17-201ENST00000479057 754 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AC093827.1-201ENST00000480094 861 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 RPS27P20-201ENST00000492051 246 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 GTF2IP11-201ENST00000526931 420 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.41□□□□□ -1.7
SSSCA1O60232 HMGN2P36-201ENST00000529541 409 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 OR8G3P-201ENST00000533406 921 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 RPA2P1-201ENST00000556557 721 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.41□□□□□ -1.7
SSSCA1O60232 WBP1LP11-201ENST00000586141 328 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AC090236.2-201ENST00000587933 1101 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 OR7A8P-201ENST00000595427 913 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 AL049840.6-201ENST00000604583 345 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms