Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC9.54□□□□□ -0.88
CUX2O14529 snoU13.20-201ENST00000459180 104 ntBASIC9.54□□□□□ -0.88
CUX2O14529 AC126615.2-201ENST00000553003 515 ntBASIC9.54□□□□□ -0.88
CUX2O14529 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC9.54□□□□□ -0.88
CUX2O14529 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.54□□□□□ -0.88
CUX2O14529 AC004890.3-201ENST00000605566 1095 ntBASIC9.54□□□□□ -0.88
CUX2O14529 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC9.54□□□□□ -0.88
CUX2O14529 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CUX2O14529 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC9.54□□□□□ -0.88
CUX2O14529 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CUX2O14529 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.54□□□□□ -0.88
CUX2O14529 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
CUX2O14529 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC9.54□□□□□ -0.88
CUX2O14529 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CUX2O14529 MFSD8-219ENST00000641228 2559 ntBASIC9.54□□□□□ -0.88
CUX2O14529 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC9.54□□□□□ -0.88
CUX2O14529 MIR130A-201ENST00000385274 89 ntBASIC9.53□□□□□ -0.88
CUX2O14529 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CUX2O14529 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
CUX2O14529 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC9.53□□□□□ -0.88
CUX2O14529 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC9.53□□□□□ -0.88
CUX2O14529 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC9.53□□□□□ -0.88
CUX2O14529 MIR4298-201ENST00000584380 73 ntBASIC9.53□□□□□ -0.88
CUX2O14529 MIR132-201ENST00000591554 101 ntBASIC9.53□□□□□ -0.88
CUX2O14529 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC9.53□□□□□ -0.88
CUX2O14529 AC025574.2-201ENST00000615621 514 ntBASIC9.53□□□□□ -0.88
CUX2O14529 AL359757.1-201ENST00000623176 255 ntBASIC9.53□□□□□ -0.88
CUX2O14529 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
CUX2O14529 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
CUX2O14529 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.53□□□□□ -0.88
CUX2O14529 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.53□□□□□ -0.88
CUX2O14529 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC9.53□□□□□ -0.88
CUX2O14529 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CUX2O14529 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC9.53□□□□□ -0.88
CUX2O14529 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.53□□□□□ -0.88
CUX2O14529 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
CUX2O14529 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CUX2O14529 AC234779.1-201ENST00000425910 285 ntBASIC9.53□□□□□ -0.88
CUX2O14529 AC092106.1-201ENST00000444291 373 ntBASIC9.53□□□□□ -0.88
CUX2O14529 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC9.53□□□□□ -0.88
CUX2O14529 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC9.53□□□□□ -0.88
CUX2O14529 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.53□□□□□ -0.88
CUX2O14529 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC9.53□□□□□ -0.88
CUX2O14529 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CUX2O14529 AL034546.1-201ENST00000623740 3693 ntBASIC9.52□□□□□ -0.88
CUX2O14529 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
CUX2O14529 SDAD1P1-202ENST00000524156 2051 ntBASIC9.52□□□□□ -0.89
CUX2O14529 AC130304.1-201ENST00000622942 2385 ntBASIC9.52□□□□□ -0.89
CUX2O14529 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CUX2O14529 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CUX2O14529 RNA5SP44-201ENST00000410446 133 ntBASIC9.52□□□□□ -0.89
CUX2O14529 FTH1P8-201ENST00000498161 514 ntBASIC9.52□□□□□ -0.89
CUX2O14529 EIF3KP3-201ENST00000514461 639 ntBASIC9.52□□□□□ -0.89
CUX2O14529 AC008033.2-201ENST00000542626 177 ntBASIC9.52□□□□□ -0.89
CUX2O14529 AC027667.1-201ENST00000545814 304 ntBASIC9.52□□□□□ -0.89
CUX2O14529 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
CUX2O14529 AC008785.1-201ENST00000624475 456 ntBASIC9.52□□□□□ -0.89
CUX2O14529 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
CUX2O14529 UG0898H09-202ENST00000623646 7040 ntBASIC9.52□□□□□ -0.89
CUX2O14529 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CUX2O14529 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CUX2O14529 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CUX2O14529 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CUX2O14529 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC9.51□□□□□ -0.89
CUX2O14529 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
CUX2O14529 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
CUX2O14529 USP9YP3-201ENST00000434481 1766 ntBASIC9.51□□□□□ -0.89
CUX2O14529 HYDIN2-203ENST00000614586 13885 ntBASIC9.51□□□□□ -0.89
CUX2O14529 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC9.51□□□□□ -0.89
CUX2O14529 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC9.51□□□□□ -0.89
CUX2O14529 AC079922.1-201ENST00000443291 359 ntBASIC9.51□□□□□ -0.89
CUX2O14529 PPIAP21-201ENST00000464473 501 ntBASIC9.51□□□□□ -0.89
CUX2O14529 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC9.51□□□□□ -0.89
CUX2O14529 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC9.51□□□□□ -0.89
CUX2O14529 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC9.51□□□□□ -0.89
CUX2O14529 OR8B1P-202ENST00000641132 1178 ntBASIC9.51□□□□□ -0.89
CUX2O14529 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
CUX2O14529 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 MAPK10-304ENST00000641341 3984 ntBASIC9.51□□□□□ -0.89
CUX2O14529 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.51□□□□□ -0.89
CUX2O14529 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CUX2O14529 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC9.51□□□□□ -0.89
CUX2O14529 POT1-202ENST00000393329 3950 ntTSL 5 BASIC9.5□□□□□ -0.89
CUX2O14529 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms