Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.06□□□□□ -1.44
O00370 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 AC022826.1-201ENST00000519383 805 ntBASIC6.06□□□□□ -1.44
O00370 HMGB1P42-201ENST00000532126 553 ntBASIC6.06□□□□□ -1.44
O00370 HSPE1P2-201ENST00000554777 306 ntBASIC6.06□□□□□ -1.44
O00370 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
O00370 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.06□□□□□ -1.44
O00370 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.06□□□□□ -1.44
O00370 AC027216.1-201ENST00000577726 685 ntBASIC6.06□□□□□ -1.44
O00370 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 AC015982.1-201ENST00000608113 465 ntBASIC6.06□□□□□ -1.44
O00370 MIR6861-201ENST00000618657 64 ntBASIC6.06□□□□□ -1.44
O00370 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 AC087565.3-203ENST00000641018 837 ntBASIC6.06□□□□□ -1.44
O00370 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
O00370 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
O00370 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
O00370 AC020656.2-201ENST00000613291 5309 ntBASIC6.06□□□□□ -1.44
O00370 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 AC015689.2-201ENST00000528172 1738 ntBASIC6.05□□□□□ -1.44
O00370 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
O00370 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.05□□□□□ -1.44
O00370 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.05□□□□□ -1.44
O00370 AL137141.1-201ENST00000624622 4836 ntBASIC6.05□□□□□ -1.44
O00370 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
O00370 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.05□□□□□ -1.44
O00370 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
O00370 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
O00370 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
O00370 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
O00370 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
O00370 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
O00370 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.05□□□□□ -1.44
O00370 EEF1B2P8-201ENST00000414101 671 ntBASIC6.05□□□□□ -1.44
O00370 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.05□□□□□ -1.44
O00370 RPS29P14-201ENST00000431518 171 ntBASIC6.05□□□□□ -1.44
O00370 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.05□□□□□ -1.44
O00370 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.05□□□□□ -1.44
O00370 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 AL161722.1-201ENST00000446972 1032 ntBASIC6.05□□□□□ -1.44
O00370 AC007998.1-201ENST00000474156 672 ntBASIC6.05□□□□□ -1.44
O00370 RPS7P6-201ENST00000485777 579 ntBASIC6.05□□□□□ -1.44
O00370 KCTD9P6-201ENST00000522306 950 ntBASIC6.05□□□□□ -1.44
O00370 MRPS16P1-201ENST00000523462 412 ntBASIC6.05□□□□□ -1.44
O00370 TRIM51DP-201ENST00000529746 596 ntBASIC6.05□□□□□ -1.44
O00370 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.05□□□□□ -1.44
O00370 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.05□□□□□ -1.44
O00370 AC139697.1-201ENST00000548429 745 ntBASIC6.05□□□□□ -1.44
O00370 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.05□□□□□ -1.44
O00370 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.05□□□□□ -1.44
O00370 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.05□□□□□ -1.44
O00370 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.05□□□□□ -1.44
O00370 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.05□□□□□ -1.44
O00370 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.05□□□□□ -1.44
O00370 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.05□□□□□ -1.44
O00370 RNU6-84P-201ENST00000607737 102 ntBASIC6.05□□□□□ -1.44
O00370 AC015712.7-201ENST00000615211 635 ntBASIC6.05□□□□□ -1.44
O00370 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.05□□□□□ -1.44
O00370 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
O00370 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
O00370 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.05□□□□□ -1.44
O00370 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
O00370 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
O00370 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
O00370 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
O00370 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
O00370 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.04□□□□□ -1.44
O00370 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.04□□□□□ -1.44
O00370 MRE11P1-201ENST00000464884 2127 ntBASIC6.04□□□□□ -1.44
O00370 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.04□□□□□ -1.44
O00370 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 RNU1-136P-201ENST00000384181 164 ntBASIC6.04□□□□□ -1.44
O00370 RNA5SP284-201ENST00000384547 118 ntBASIC6.04□□□□□ -1.44
O00370 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
O00370 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.04□□□□□ -1.44
O00370 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.04□□□□□ -1.44
O00370 RNGTTP1-201ENST00000420965 728 ntBASIC6.04□□□□□ -1.44
O00370 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.04□□□□□ -1.44
O00370 MTND6P12-201ENST00000428247 522 ntBASIC6.04□□□□□ -1.44
O00370 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.04□□□□□ -1.44
O00370 RPL23AP19-201ENST00000436229 369 ntBASIC6.04□□□□□ -1.44
O00370 SUMO2P3-201ENST00000438311 288 ntBASIC6.04□□□□□ -1.44
O00370 RPL5P25-201ENST00000441148 775 ntBASIC6.04□□□□□ -1.44
O00370 MEMO1P4-201ENST00000453590 386 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms