Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
DDX39AO00148 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DDX39AO00148 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
DDX39AO00148 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DDX39AO00148 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX39AO00148 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX39AO00148 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX39AO00148 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
DDX39AO00148 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
DDX39AO00148 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 DDX18P6-201ENST00000450119 1997 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 GAPDHP24-201ENST00000328713 983 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX39AO00148 AC007068.1-201ENST00000396690 844 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 AL589994.1-201ENST00000404962 340 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 RN7SKP59-201ENST00000410520 314 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX39AO00148 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX39AO00148 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 MTND6P5-201ENST00000448266 512 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
DDX39AO00148 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX39AO00148 AC110749.1-201ENST00000462007 357 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 RPL5P16-201ENST00000471467 790 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 AC074386.1-201ENST00000476560 767 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 SIAH1P1-201ENST00000479411 923 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 AC253576.1-201ENST00000511645 1156 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX39AO00148 AC021146.10-201ENST00000515628 706 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 RN7SKP248-201ENST00000516278 305 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX39AO00148 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX39AO00148 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX39AO00148 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX39AO00148 MIR6826-201ENST00000617808 98 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 AP003400.2-201ENST00000624036 666 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX39AO00148 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX39AO00148 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX39AO00148 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
DDX39AO00148 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX39AO00148 NAMPTP1-201ENST00000440465 2514 ntBASIC6.32□□□□□ -1.4
DDX39AO00148 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
DDX39AO00148 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX39AO00148 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX39AO00148 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
DDX39AO00148 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX39AO00148 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX39AO00148 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX39AO00148 RN7SKP160-201ENST00000363804 340 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 RNA5SP234-201ENST00000363916 119 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 AL121977.1-201ENST00000401636 979 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX39AO00148 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX39AO00148 RPL35AP24-201ENST00000413846 330 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 RPS26P38-201ENST00000414476 348 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 MTND4LP21-201ENST00000415303 295 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX39AO00148 GTF3AP1-201ENST00000416942 1004 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX39AO00148 NFYAP1-201ENST00000431953 972 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX39AO00148 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.31□□□□□ -1.4
DDX39AO00148 AC100832.1-201ENST00000471945 383 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 RN7SL547P-201ENST00000490793 290 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX39AO00148 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
DDX39AO00148 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX39AO00148 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX39AO00148 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX39AO00148 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX39AO00148 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX39AO00148 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.31□□□□□ -1.4
DDX39AO00148 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 AC007204.2-201ENST00000615022 616 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 AC132068.1-201ENST00000623805 459 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 AP000550.3-201ENST00000637734 379 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX39AO00148 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
DDX39AO00148 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
DDX39AO00148 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX39AO00148 CASC19-248ENST00000641674 1356 ntBASIC6.31□□□□□ -1.4
DDX39AO00148 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX39AO00148 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DDX39AO00148 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
DDX39AO00148 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.3□□□□□ -1.4
DDX39AO00148 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DDX39AO00148 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.3□□□□□ -1.4
DDX39AO00148 AL161912.4-201ENST00000623889 2468 ntBASIC6.3□□□□□ -1.4
DDX39AO00148 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
DDX39AO00148 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DDX39AO00148 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.3□□□□□ -1.4
DDX39AO00148 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms