Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC073111.2-201ENST00000605657 1075 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC104763.3-201ENST00000613765 618 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC096861.1-201ENST00000616652 240 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC106872.5-201ENST00000508856 1416 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL359091.1-201ENST00000449048 1734 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC011369.2-201ENST00000624423 1567 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC119674.1-213ENST00000641177 1386 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 MIR143-201ENST00000385300 106 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 RNU11-201ENST00000387069 134 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC087752.1-201ENST00000391360 558 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 RN7SKP229-201ENST00000410465 302 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 RN7SKP161-201ENST00000411110 305 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 MRPS33P4-201ENST00000434892 317 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL645638.1-201ENST00000440519 361 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 OR13K1P-201ENST00000444577 975 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 ZNF619P1-201ENST00000446539 752 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC009963.4-201ENST00000448535 339 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 RPSAP37-201ENST00000470913 821 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC093719.1-201ENST00000480427 441 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC083795.1-201ENST00000491760 320 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 OR4A42P-201ENST00000531397 938 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC092865.1-201ENST00000544395 1023 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL360012.1-201ENST00000602813 131 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL356608.1-201ENST00000610034 820 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 MIR6809-201ENST00000612189 116 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 MIR6886-201ENST00000619864 61 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC091046.2-201ENST00000620775 665 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC110373.1-201ENST00000505994 3505 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AC012254.3-201ENST00000591183 2117 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 AL731532.1-201ENST00000623972 4236 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 WDR95P-201ENST00000425638 1542 ntBASIC6.5□□□□□ -1.37
SSX2IPQ9Y2D8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 AC027088.4-201ENST00000611559 1947 ntBASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 RNU4-39P-201ENST00000362455 127 ntBASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 RN7SKP292-201ENST00000365522 317 ntBASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 RNU11-6P-201ENST00000391127 133 ntBASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 RN7SKP293-201ENST00000411389 296 ntBASIC6.49□□□□□ -1.37
SSX2IPQ9Y2D8 AL096829.1-201ENST00000413677 457 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms