Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 RPL10P10-201ENST00000403509 664 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 RN7SKP129-201ENST00000410288 299 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 RN7SKP254-201ENST00000410685 310 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 ATG4AP1-201ENST00000416893 538 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC004448.2-201ENST00000422360 586 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 MTND1P14-201ENST00000427400 950 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC069154.1-201ENST00000432914 542 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC004865.1-201ENST00000442276 1003 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 MTCO1P48-201ENST00000448024 1096 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 RPL7P51-201ENST00000490532 749 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 NPM1P21-201ENST00000513394 762 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 TPRKBP2-201ENST00000565969 475 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC090826.1-203ENST00000569235 490 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC018714.1-201ENST00000605028 208 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC092954.2-201ENST00000609103 430 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 MIR6721-201ENST00000617181 87 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC073569.3-201ENST00000619055 682 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC099654.5-201ENST00000636479 350 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AC069222.1-201ENST00000608028 3360 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 MAPK10-371ENST00000641952 5209 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 MTCO1P18-201ENST00000455518 1419 ntBASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.56□□□□□ -1.04
ZC3H4Q9UPT8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RNU6-31P-201ENST00000384388 108 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RNY3P10-201ENST00000384764 102 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AL079342.2-201ENST00000403367 482 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 UQCRHP1-204ENST00000424609 274 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AL645939.3-201ENST00000435408 225 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC117395.2-201ENST00000463122 1128 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 OR11I1P-201ENST00000486033 954 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC090071.1-201ENST00000507713 644 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC074344.1-201ENST00000512823 224 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RN7SKP244-201ENST00000516513 307 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 OR5AZ1P-201ENST00000527448 943 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 OR52K3P-201ENST00000531655 943 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC074029.1-201ENST00000552531 1044 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AL078601.3-201ENST00000573303 535 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC008507.1-201ENST00000587506 734 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AP001542.2-201ENST00000593141 364 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC092354.1-201ENST00000606057 376 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC006566.1-201ENST00000608943 513 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AL136097.3-201ENST00000611097 505 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms