Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC016745.2-201ENST00000608834 3443 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 OR52B3P-201ENST00000314715 928 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC009784.1-201ENST00000426484 460 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 DNAJA1P5-201ENST00000440278 943 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC005297.1-201ENST00000444765 862 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 LRRC37A14P-201ENST00000452297 462 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AL445665.1-202ENST00000452436 324 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC105420.1-201ENST00000504389 582 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC021106.1-201ENST00000509020 1058 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 BCAS2P1-201ENST00000528022 632 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 OR4A43P-201ENST00000532938 908 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC009237.13-201ENST00000603193 276 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AL162574.1-201ENST00000615702 950 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 MIR6071-201ENST00000616741 78 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 AC005261.2-201ENST00000593427 4258 ntBASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VPS29Q9UBQ0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC023490.2-201ENST00000359859 470 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 SNORD56.6-201ENST00000384569 71 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 MIR551A-201ENST00000385042 96 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 RPSAP35-201ENST00000413753 818 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC108751.3-201ENST00000461814 1020 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 RN7SL583P-201ENST00000475692 287 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC026782.2-201ENST00000510845 636 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC091912.1-201ENST00000511351 248 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 LSM1P2-201ENST00000604911 322 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AL096712.1-201ENST00000614561 159 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AL353684.1-201ENST00000622677 1120 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms