Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC104966.1-201ENST00000467010 1464 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 TMSB4XP2-201ENST00000335179 210 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 RNA5SP273-201ENST00000362484 113 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 RNU1-150P-201ENST00000362491 162 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC007161.1-204ENST00000423039 460 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AL354893.1-201ENST00000433735 348 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 RPS10P18-201ENST00000442662 495 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC021006.1-201ENST00000489849 553 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 RNA5SP438-201ENST00000516561 112 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC005479.3-201ENST00000602790 431 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC108738.1-201ENST00000603703 237 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC006363.1-201ENST00000603806 463 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC003973.3-201ENST00000624863 2822 ntBASIC5.25□□□□□ -1.57
VAPAQ9P0L0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.25□□□□□ -1.57
VAPAQ9P0L0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC026523.2-201ENST00000625039 7739 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 COX6B1P3-201ENST00000312310 260 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 SNORA64.1-201ENST00000362600 132 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 SNORD56.6-201ENST00000384569 71 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AK4P4-201ENST00000419465 646 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 BX323845.3-201ENST00000428215 527 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 RN7SL583P-201ENST00000475692 287 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 CYCSP38-201ENST00000559840 322 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 RN7SL290P-201ENST00000578661 300 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 H3F3BP2-201ENST00000583907 357 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 OR51C1P-201ENST00000608504 942 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AL356608.1-201ENST00000610034 820 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AC026367.3-201ENST00000619032 590 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.24□□□□□ -1.57
VAPAQ9P0L0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms