Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 WDR95P-201ENST00000425638 1542 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 HSPD1P7-201ENST00000447985 1686 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AL355834.1-201ENST00000556602 3965 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC010132.2-201ENST00000295493 1043 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 OR52B3P-201ENST00000314715 928 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 SNORA64.1-201ENST00000362600 132 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 MIR137-201ENST00000385223 102 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 RNA5SP105-201ENST00000391123 113 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 SLC20A1P1-201ENST00000413906 956 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AK4P4-201ENST00000419465 646 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 RPS23P9-201ENST00000448848 438 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 BUD31P2-201ENST00000449374 300 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 MIR4260-201ENST00000583107 67 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC084036.1-201ENST00000609190 508 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC000095.2-202ENST00000637415 154 ntBASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
BLOC1S4Q9NUP1 AC020633.1-201ENST00000468439 2247 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 NEPNP-201ENST00000404786 1371 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 RNA5SP326-201ENST00000363209 110 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL512504.1-201ENST00000415494 778 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 HMGB3P24-201ENST00000433260 622 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 HMGB3P10-201ENST00000434734 572 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 IGLV3-24-201ENST00000517477 197 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AC137627.1-201ENST00000545761 289 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL096712.1-201ENST00000614561 159 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 RN7SL544P-201ENST00000617232 284 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 RN7SL763P-201ENST00000620922 284 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AC232271.1-201ENST00000602455 2715 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 AL161912.4-201ENST00000623889 2468 ntBASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
BLOC1S4Q9NUP1 ZNF402P-201ENST00000404435 3100 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms