Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LITAFQ99732 RNU6-1242P-201ENST00000391052 103 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 HMGB1P13-201ENST00000406019 642 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC092638.1-201ENST00000411966 1275 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 CBX1P3-201ENST00000413296 527 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 MTND4P3-201ENST00000417829 541 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 USP9YP11-201ENST00000427537 717 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC084290.1-201ENST00000434995 374 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC073052.1-201ENST00000440417 714 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC092568.1-201ENST00000440950 1284 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC016908.1-201ENST00000442571 1219 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC023512.1-201ENST00000444513 499 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC005517.1-201ENST00000452091 489 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 EIF3LP2-201ENST00000457262 807 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 RN7SL213P-201ENST00000463482 317 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 RN7SL308P-201ENST00000464971 297 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 RN7SL228P-201ENST00000470060 303 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 PDCL3P4-201ENST00000489621 720 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC025459.1-201ENST00000504072 156 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC105420.1-201ENST00000504389 582 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 SNORA31.13-201ENST00000516624 135 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC013701.1-201ENST00000522657 465 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 HNRNPCP8-201ENST00000528764 888 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 NDUFS5P6-201ENST00000529136 295 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.12□□□□□ -1.75
LITAFQ99732 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 AGGF1P6-201ENST00000569213 976 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 RN7SL25P-201ENST00000583862 260 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 AP002906.1-201ENST00000603405 233 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 COX6CP16-201ENST00000603667 216 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC069304.3-201ENST00000603938 1084 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AL035411.2-201ENST00000604022 421 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AL049844.2-201ENST00000604280 628 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC019257.2-201ENST00000605539 497 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC015712.7-201ENST00000615211 635 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC013470.4-201ENST00000619978 986 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC123767.1-202ENST00000620407 817 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AP002782.1-201ENST00000623107 614 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC004943.3-201ENST00000624116 600 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AL357140.4-201ENST00000636827 412 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC139713.2-210ENST00000641741 992 ntBASIC4.12□□□□□ -1.75
LITAFQ99732 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LITAFQ99732 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LITAFQ99732 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LITAFQ99732 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.12□□□□□ -1.75
LITAFQ99732 ICE2P1-201ENST00000512800 1849 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LITAFQ99732 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms