Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.18□□□□□ -1.42
RAD9AQ99638 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.18□□□□□ -1.42
RAD9AQ99638 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAD9AQ99638 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RAD9AQ99638 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAD9AQ99638 NCOA4P2-201ENST00000340589 1813 ntBASIC6.18□□□□□ -1.42
RAD9AQ99638 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.18□□□□□ -1.42
RAD9AQ99638 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC01963-201ENST00000562038 3148 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC131971.1-201ENST00000332881 1482 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RAD9AQ99638 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.17□□□□□ -1.42
RAD9AQ99638 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC005294.1-201ENST00000355509 281 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 U8.4-201ENST00000363626 134 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
RAD9AQ99638 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AL645733.1-201ENST00000402250 217 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 RANP7-201ENST00000418085 644 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC005033.1-201ENST00000428904 813 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 OR52B5P-201ENST00000435337 951 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.17□□□□□ -1.42
RAD9AQ99638 RN7SL97P-201ENST00000486780 299 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 GOLGA5P1-201ENST00000507317 980 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.17□□□□□ -1.42
RAD9AQ99638 AP002884.5-201ENST00000595053 1132 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AC079791.1-201ENST00000605356 973 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 PPATP2-201ENST00000605635 508 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AC022960.2-201ENST00000616300 666 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AC073342.3-201ENST00000624211 193 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 OR52B5P-202ENST00000641118 1110 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 MIPEPP2-201ENST00000422560 1819 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.17□□□□□ -1.42
RAD9AQ99638 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 AC087516.1-201ENST00000561236 2428 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RAD9AQ99638 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 IMMTP1-201ENST00000435590 2219 ntBASIC6.17□□□□□ -1.42
RAD9AQ99638 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.17□□□□□ -1.42
RAD9AQ99638 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAD9AQ99638 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RAD9AQ99638 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.17□□□□□ -1.42
RAD9AQ99638 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAD9AQ99638 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAD9AQ99638 AC023421.1-201ENST00000590535 1785 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAD9AQ99638 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAD9AQ99638 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAD9AQ99638 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RAD9AQ99638 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAD9AQ99638 AL121835.1-201ENST00000404250 354 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 RN7SKP279-201ENST00000411383 298 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.16□□□□□ -1.42
RAD9AQ99638 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.16□□□□□ -1.42
RAD9AQ99638 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.16□□□□□ -1.42
RAD9AQ99638 CYCSP6-201ENST00000434498 302 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.16□□□□□ -1.42
RAD9AQ99638 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.16□□□□□ -1.42
RAD9AQ99638 AL603882.1-201ENST00000463059 681 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.16□□□□□ -1.42
RAD9AQ99638 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.16□□□□□ -1.42
RAD9AQ99638 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.16□□□□□ -1.42
RAD9AQ99638 CYP4F27P-201ENST00000514557 494 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 RNU6-1334P-201ENST00000516032 105 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 AP001804.1-201ENST00000526868 919 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 HIGD1AP5-201ENST00000529959 259 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 AC022832.1-201ENST00000530718 645 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 OR5D15P-201ENST00000531671 942 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 OR4A6P-201ENST00000534364 970 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.16□□□□□ -1.42
RAD9AQ99638 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.16□□□□□ -1.42
RAD9AQ99638 OR4H6P-201ENST00000563771 921 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.16□□□□□ -1.42
RAD9AQ99638 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.16□□□□□ -1.42
RAD9AQ99638 AC087763.1-201ENST00000603391 286 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 AL049539.1-201ENST00000611964 459 ntBASIC6.16□□□□□ -1.42
RAD9AQ99638 AC090607.5-201ENST00000615692 224 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms