Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC025470.1-201ENST00000510053 2032 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AL355834.1-201ENST00000556602 3965 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC092681.1-201ENST00000297369 291 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 RNA5SP242-201ENST00000364171 118 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 RN7SKP124-201ENST00000364730 341 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 RN7SKP81-201ENST00000365603 331 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 GABARAPL3-201ENST00000412799 354 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC012075.1-201ENST00000436549 580 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC073465.2-201ENST00000440938 498 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 CYCSP51-201ENST00000443545 318 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 PSAT1P4-201ENST00000466500 526 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 RPSAP39-201ENST00000467439 883 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC021106.1-201ENST00000509020 1058 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 RN7SKP99-201ENST00000517028 307 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 IGLVIV-64-201ENST00000518581 301 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 SNORD95-201ENST00000579879 68 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 MELK-211ENST00000545008 2236 ntTSL 2 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
GAFA1Q96PS6 AL049634.1-201ENST00000453770 1720 ntBASIC4.58□□□□□ -1.68
GAFA1Q96PS6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC007938.2-201ENST00000604666 2634 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 RNA5SP234-201ENST00000363916 119 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AL391422.1-201ENST00000402155 436 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 Z93019.1-201ENST00000416450 973 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AL391987.1-201ENST00000441025 200 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 RANP1-206ENST00000455094 651 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 MTND6P2-201ENST00000512226 524 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC233699.1-201ENST00000569955 1168 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC009237.13-201ENST00000603193 276 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms