Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL590396.2-201ENST00000636511 1041 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC232271.1-201ENST00000602455 2715 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 RNU105B-201ENST00000364478 208 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 SNRPEP6-201ENST00000407465 277 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AL096829.1-201ENST00000413677 457 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 RPS3P2-201ENST00000421346 701 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 MTND2P9-201ENST00000422293 931 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 ZNF965P-201ENST00000432501 817 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 REG1CP-206ENST00000447469 496 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AL162739.1-201ENST00000450606 307 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 PPIAP27-201ENST00000453800 265 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 EIF2S2P4-201ENST00000461070 984 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 CABYRP1-201ENST00000465493 1045 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC015864.1-201ENST00000496512 544 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC067904.2-201ENST00000517322 1283 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC092332.1-201ENST00000563684 829 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 BNIP3P27-201ENST00000599991 412 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 CR589904.2-201ENST00000612533 440 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC096708.4-201ENST00000620563 552 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC073488.3-201ENST00000631611 778 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 AC140134.1-201ENST00000511830 3544 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 THAP12P9-201ENST00000503971 2360 ntBASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CHMP4CQ96CF2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 QRSL1P1-201ENST00000400977 1540 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 UGT2B24P-201ENST00000514441 1597 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 RNA5SP273-201ENST00000362484 113 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 RNU6-1176P-201ENST00000390955 107 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 PTGES3P2-201ENST00000407942 482 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 CBX1P3-201ENST00000413296 527 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 GLUD1P9-201ENST00000420997 1173 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 BX323845.3-201ENST00000428215 527 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 CUBNP2-201ENST00000443534 1139 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC006326.1-201ENST00000445465 787 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC009963.4-201ENST00000448535 339 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC124945.1-201ENST00000485133 188 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 RPS26P24-201ENST00000497656 331 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC010468.3-201ENST00000508225 458 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 HMGN1P15-201ENST00000513870 295 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 IGKV2-4-201ENST00000523070 340 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms