Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC024651.2-201ENST00000562480 2098 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.91□□□□□ -1.3
ERCC4Q92889 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 RNU6-697P-201ENST00000363348 107 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 CXADRP1-201ENST00000398098 1095 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 RNU4-27P-201ENST00000410889 139 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 RPL21P50-201ENST00000417698 477 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 OSTCP4-201ENST00000424397 449 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AL731534.1-201ENST00000434711 269 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC128677.1-201ENST00000436016 442 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 RPL12P31-201ENST00000478433 450 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 NPM1P29-201ENST00000483112 803 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 SNX18P24-201ENST00000505249 671 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 OR4D12P-201ENST00000509361 911 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.91□□□□□ -1.3
ERCC4Q92889 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 OR56A7P-201ENST00000524865 941 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AC118942.1-201ENST00000529674 1035 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AC091515.1-201ENST00000548110 679 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AC093014.1-201ENST00000548926 724 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.91□□□□□ -1.3
ERCC4Q92889 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC4Q92889 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AL096803.3-201ENST00000609032 532 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 CXADRP3-202ENST00000617265 1100 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.91□□□□□ -1.3
ERCC4Q92889 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
ERCC4Q92889 CR788268.1-201ENST00000603931 1809 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
ERCC4Q92889 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC4Q92889 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 AC017002.4-201ENST00000604721 1525 ntBASIC6.91□□□□□ -1.3
ERCC4Q92889 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
ERCC4Q92889 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
ERCC4Q92889 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.9□□□□□ -1.3
ERCC4Q92889 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC4Q92889 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
ERCC4Q92889 RPL11P4-201ENST00000332269 436 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 RNA5SP346-201ENST00000363541 121 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AL158050.1-201ENST00000416077 457 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 NIFKP3-201ENST00000417799 865 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 Z82198.3-201ENST00000421145 199 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 OR6R1P-201ENST00000431838 940 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 USP24P1-201ENST00000433802 779 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AL117351.1-201ENST00000438864 766 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.9□□□□□ -1.3
ERCC4Q92889 RNFT1P2-201ENST00000443064 757 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 CXCR2P1-202ENST00000443392 1074 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 AC092601.1-201ENST00000444526 383 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 Z83846.1-201ENST00000446798 265 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 RSU1P1-201ENST00000453416 441 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 snoU13.29-201ENST00000459370 104 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 SNORD11.1-201ENST00000459482 85 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC015864.1-201ENST00000496512 544 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC111000.6-201ENST00000514471 709 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC4Q92889 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.9□□□□□ -1.3
ERCC4Q92889 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.9□□□□□ -1.3
ERCC4Q92889 AC135983.3-201ENST00000528049 1226 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC4Q92889 OR8K4P-201ENST00000534608 872 ntBASIC6.9□□□□□ -1.3
ERCC4Q92889 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms