Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 OR7A1P-201ENST00000601206 970 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 MIR6820-201ENST00000611508 62 ntBASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
SHROOM3Q8TF72 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC093297.3-201ENST00000607056 2517 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 RNU1-136P-201ENST00000384181 164 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AL645927.1-201ENST00000396783 406 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AL589647.1-201ENST00000402485 466 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC093155.2-201ENST00000420734 937 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC073072.2-201ENST00000447425 348 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 RPS23P9-201ENST00000448848 438 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 RPS17P15-201ENST00000475609 349 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC021106.1-201ENST00000509020 1058 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 SNORA43.3-201ENST00000517240 103 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC021678.3-201ENST00000517893 476 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 MIR4260-201ENST00000583107 67 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC063977.5-201ENST00000601044 974 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 PPATP2-201ENST00000605635 508 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC073342.3-201ENST00000624211 193 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AL139128.1-201ENST00000413921 941 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 BX276092.6-201ENST00000430476 250 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AURKAPS1-201ENST00000451805 1212 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 VDAC2P4-201ENST00000452925 711 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 BX276092.8-201ENST00000455722 250 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 MIR6133-201ENST00000617057 108 ntBASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM3Q8TF72 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 OR4F13P-202ENST00000560066 2054 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC004076.2-201ENST00000620532 3323 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 U3.10-201ENST00000364459 214 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 VN1R110P-201ENST00000438988 971 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC099521.1-201ENST00000482557 334 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 MRPS16P1-201ENST00000523462 412 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AL121594.2-201ENST00000541658 472 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AP000769.2-201ENST00000602344 396 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AC136428.4-201ENST00000634254 1155 ntBASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms