Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 RN7SKP273-201ENST00000411392 314 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AC016397.1-201ENST00000412463 242 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 OR6E1P-201ENST00000414424 923 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AK4P4-201ENST00000419465 646 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 MOB1AP2-201ENST00000446060 614 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 MTATP6P14-201ENST00000455189 673 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 RN7SL269P-201ENST00000467795 305 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AC006463.2-201ENST00000473326 348 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 RN7SL57P-201ENST00000493687 290 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AC106800.3-201ENST00000511389 308 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 RN7SL544P-201ENST00000617232 284 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 RN7SL763P-201ENST00000620922 284 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 AC087565.3-203ENST00000641018 837 ntBASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SMC1BQ8NDV3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 OR4K17-201ENST00000315543 1032 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 MIR199B-201ENST00000384849 110 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 ST13P16-201ENST00000401760 781 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 CEACAMP7-201ENST00000444105 496 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 Z80107.2-201ENST00000445127 392 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 ZNF619P1-201ENST00000446539 752 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC009963.2-201ENST00000453431 138 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 NPM1P17-201ENST00000479221 602 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC079841.1-201ENST00000481228 950 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 RN7SL97P-201ENST00000486780 299 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 RN7SL547P-201ENST00000490793 290 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC026826.1-201ENST00000493002 361 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 RNU6-319P-201ENST00000516025 108 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC084337.1-201ENST00000524809 686 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 SNORA70D-201ENST00000578836 135 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC107993.1-201ENST00000591343 684 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AL359513.1-201ENST00000614364 557 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC245389.2-201ENST00000616023 576 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC242843.1-201ENST00000618702 573 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AL354718.1-201ENST00000619764 589 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC010435.1-201ENST00000623353 1177 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC008993.2-201ENST00000631744 806 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 AC016583.1-201ENST00000624221 2431 ntBASIC7.28□□□□□ -1.24
SMC1BQ8NDV3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SMC1BQ8NDV3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.27□□□□□ -1.24
SMC1BQ8NDV3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms