Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 AC015819.1-201ENST00000613588 663 ntBASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 AL161756.3-201ENST00000641216 2071 ntBASIC5.32□□□□□ -1.56
LINC00346Q8IVM7 PARP4P2-201ENST00000446672 3326 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AL137141.1-201ENST00000624622 4836 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 SNORD1C-201ENST00000363315 78 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 MIR191-201ENST00000384873 92 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RN7SKP146-201ENST00000410242 334 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RN7SKP166-201ENST00000410812 305 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RN7SKP108-201ENST00000411367 328 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RPL35AP31-201ENST00000418340 337 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AP000936.3-201ENST00000438127 255 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 CUBNP2-201ENST00000443534 1139 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC016027.4-201ENST00000450866 277 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RPS27P20-201ENST00000492051 246 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RPS27AP18-201ENST00000515536 459 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 SNORA76.2-201ENST00000517095 137 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC018442.3-201ENST00000523025 183 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 OR56A7P-201ENST00000524865 941 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC244502.2-201ENST00000543361 851 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC068305.2-201ENST00000550567 1205 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AL136520.1-202ENST00000555494 763 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 MT1CP-201ENST00000567054 174 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 MRPS21P8-201ENST00000569196 235 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AC005479.3-201ENST00000602790 431 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 AL135999.3-201ENST00000610501 812 ntBASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00346Q8IVM7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AL512283.1-201ENST00000606756 1384 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC117409.1-201ENST00000470499 1310 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 Y_RNA.110-201ENST00000363220 99 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 OR6K3-202ENST00000368146 996 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 TAF9BP2-201ENST00000400856 499 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 NMD3P2-201ENST00000421815 761 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 CFL1P4-201ENST00000451536 498 ntBASIC5.3□□□□□ -1.56
LINC00346Q8IVM7 AC002553.3-201ENST00000453002 341 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms