Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 RNA5SP302-201ENST00000364896 100 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 MIR138-2-201ENST00000384916 84 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 SNORA40.2-201ENST00000390847 128 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 BTF3L4P3-201ENST00000418879 476 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AL139413.1-201ENST00000421309 217 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 CYCSP46-201ENST00000423569 204 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 CNOT7P1-201ENST00000429006 852 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AF274573.1-201ENST00000430535 494 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 DBIL5P2-201ENST00000443827 253 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC019080.2-201ENST00000453859 394 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC084024.2-201ENST00000503480 791 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC104090.1-201ENST00000506341 1171 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 RNU6-964P-201ENST00000516524 69 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 Y_RNA.701-201ENST00000516812 110 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC010680.3-201ENST00000604215 520 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC005070.2-201ENST00000604391 260 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AL049840.6-201ENST00000604583 345 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 pRNA.9-201ENST00000618609 89 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 LRRC77P-213ENST00000637727 880 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AL356361.1-201ENST00000400943 1459 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 AC104837.1-201ENST00000444644 1587 ntBASIC6.44□□□□□ -1.38
ATG4DQ86TL0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATG4DQ86TL0 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC009237.3-203ENST00000442128 3551 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 Y_RNA.38-201ENST00000362617 102 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RNU4-81P-201ENST00000363561 144 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RNU6-876P-201ENST00000391295 104 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 FABP7P1-201ENST00000424004 391 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 OR8F1P-201ENST00000425243 930 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 CYP4F34P-201ENST00000425951 481 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 NPM1P22-201ENST00000427761 952 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC073614.1-201ENST00000438690 650 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 BX005266.3-201ENST00000443013 1075 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 SDHCP3-201ENST00000445371 506 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RPL7L1P3-201ENST00000455249 689 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC236972.4-201ENST00000458091 963 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AL928654.1-201ENST00000476081 354 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC116337.2-201ENST00000477662 156 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 RPL23AP8-201ENST00000479812 475 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AL079303.1-201ENST00000486611 463 ntBASIC6.43□□□□□ -1.38
ATG4DQ86TL0 AC069439.1-201ENST00000494739 167 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms