Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 RNU1-150P-201ENST00000362491 162 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 GCNT6-201ENST00000379591 934 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 OR1F12-201ENST00000402365 945 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL357752.1-201ENST00000412817 349 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL354868.1-201ENST00000417077 482 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 BX323845.3-201ENST00000428215 527 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC110602.1-201ENST00000437414 318 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC009963.4-201ENST00000448535 339 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL353718.1-201ENST00000451028 517 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 OFD1P3Y-201ENST00000453312 783 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 RPS3AP53-201ENST00000454716 778 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 CTSLP6-201ENST00000458273 1002 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL122020.1-201ENST00000472287 459 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC122718.2-201ENST00000505325 591 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC136777.2-201ENST00000522979 358 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC138701.1-201ENST00000524329 714 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC027369.2-201ENST00000528030 440 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC096996.1-201ENST00000563813 325 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC006116.5-201ENST00000591936 559 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 BNIP3P31-201ENST00000604515 566 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 RPL12P48-201ENST00000605620 304 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC024884.1-201ENST00000620583 399 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL158152.1-201ENST00000602652 1435 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 AL355488.2-201ENST00000609909 2850 ntBASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZNF549Q6P9A3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
ZNF549Q6P9A3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
ZNF549Q6P9A3 AC004076.2-201ENST00000620532 3323 ntBASIC5.71□□□□□ -1.49
ZNF549Q6P9A3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
ZNF549Q6P9A3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 ZNF402P-201ENST00000404435 3100 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 PDZK1P1-202ENST00000425209 1350 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AL590623.1-201ENST00000427864 105 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AL136455.1-201ENST00000441083 1240 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 RNF2P1-201ENST00000442955 1010 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AL606517.1-201ENST00000446914 387 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AP002884.1-201ENST00000479691 655 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 RPL37P23-201ENST00000492641 294 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 DUTP1-201ENST00000493631 470 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC093534.1-201ENST00000504977 132 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC025458.1-201ENST00000506046 166 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 MTND3P24-201ENST00000506306 329 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC092944.2-201ENST00000605443 889 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms