Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 WBP1LP12-201ENST00000604449 331 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 NDUFB9P1-201ENST00000604683 510 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 AC009779.8-202ENST00000607990 932 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 AC089999.3-201ENST00000622440 577 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.2□□□□□ -1.26
SOX4Q06945 AC073488.9-201ENST00000631601 754 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
SOX4Q06945 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.2□□□□□ -1.26
SOX4Q06945 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.2□□□□□ -1.26
SOX4Q06945 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
SOX4Q06945 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.2□□□□□ -1.26
SOX4Q06945 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SOX4Q06945 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX4Q06945 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SOX4Q06945 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.2□□□□□ -1.26
SOX4Q06945 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC073429.2-201ENST00000569694 1444 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 AC087359.1-201ENST00000508335 1740 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AL603750.1-201ENST00000624216 1717 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 RN7SKP171-201ENST00000364417 303 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 VDAC2P1-201ENST00000399358 958 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 AL663061.1-201ENST00000416625 580 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 Z75741.2-201ENST00000417272 1167 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX4Q06945 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX4Q06945 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC007327.1-201ENST00000447461 264 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 RPL5P32-201ENST00000454085 879 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 MTCO3P38-201ENST00000468910 766 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX4Q06945 RN7SL741P-201ENST00000482473 289 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 OR7E157P-201ENST00000494376 911 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX4Q06945 HPRT1P2-201ENST00000505250 544 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC093281.2-201ENST00000510153 597 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC011352.2-201ENST00000514574 1016 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 AP003033.2-201ENST00000528901 805 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 MIR4999-201ENST00000585029 91 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 AC011500.1-201ENST00000601963 469 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC012368.3-201ENST00000604190 219 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC008498.1-201ENST00000613012 531 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC026368.1-201ENST00000614934 690 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AP000577.1-201ENST00000624366 878 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX4Q06945 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SOX4Q06945 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX4Q06945 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 AC122713.2-201ENST00000624942 3335 ntBASIC7.19□□□□□ -1.26
SOX4Q06945 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX4Q06945 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SOX4Q06945 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.18□□□□□ -1.26
SOX4Q06945 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SOX4Q06945 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SOX4Q06945 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.18□□□□□ -1.26
SOX4Q06945 AC005839.1-201ENST00000624148 3213 ntBASIC7.18□□□□□ -1.26
SOX4Q06945 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SOX4Q06945 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SOX4Q06945 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms