Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LTBQ06643 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBQ06643 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LTBQ06643 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LTBQ06643 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LTBQ06643 RNA5SP514-201ENST00000363717 111 ntBASIC5.47□□□□□ -1.53
LTBQ06643 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 SUGT1P2-201ENST00000379452 992 ntBASIC5.47□□□□□ -1.53
LTBQ06643 U3.25-201ENST00000391209 220 ntBASIC5.47□□□□□ -1.53
LTBQ06643 AL096800.1-201ENST00000405326 893 ntBASIC5.47□□□□□ -1.53
LTBQ06643 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 AC092651.1-201ENST00000426110 312 ntBASIC5.47□□□□□ -1.53
LTBQ06643 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 IGLV3-4-201ENST00000432300 244 ntBASIC5.47□□□□□ -1.53
LTBQ06643 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 AL162739.1-201ENST00000450606 307 ntBASIC5.47□□□□□ -1.53
LTBQ06643 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.47□□□□□ -1.53
LTBQ06643 AC128716.1-201ENST00000475129 166 ntBASIC5.47□□□□□ -1.53
LTBQ06643 RPL23AP40-201ENST00000487630 390 ntBASIC5.47□□□□□ -1.53
LTBQ06643 UBE2V1P12-201ENST00000503954 474 ntBASIC5.47□□□□□ -1.53
LTBQ06643 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 AC092593.2-201ENST00000513866 913 ntBASIC5.47□□□□□ -1.53
LTBQ06643 RNA5SP271-201ENST00000516700 88 ntBASIC5.47□□□□□ -1.53
LTBQ06643 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LTBQ06643 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 AC244502.2-201ENST00000543361 851 ntBASIC5.47□□□□□ -1.53
LTBQ06643 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LTBQ06643 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.47□□□□□ -1.53
LTBQ06643 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 MIR4489-201ENST00000578869 62 ntBASIC5.47□□□□□ -1.53
LTBQ06643 MIR1273E-201ENST00000581165 102 ntBASIC5.47□□□□□ -1.53
LTBQ06643 MIR3176-201ENST00000582210 90 ntBASIC5.47□□□□□ -1.53
LTBQ06643 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 AC009237.12-201ENST00000604755 742 ntBASIC5.47□□□□□ -1.53
LTBQ06643 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBQ06643 AC096861.1-201ENST00000616652 240 ntBASIC5.47□□□□□ -1.53
LTBQ06643 RFPL4AP6-201ENST00000616792 846 ntBASIC5.47□□□□□ -1.53
LTBQ06643 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LTBQ06643 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 AC004656.1-201ENST00000568479 4951 ntBASIC5.47□□□□□ -1.53
LTBQ06643 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBQ06643 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
LTBQ06643 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
LTBQ06643 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.46□□□□□ -1.53
LTBQ06643 AC139426.3-201ENST00000605648 2059 ntBASIC5.46□□□□□ -1.53
LTBQ06643 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.46□□□□□ -1.53
LTBQ06643 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 SNORA21-201ENST00000362423 132 ntBASIC5.46□□□□□ -1.54
LTBQ06643 SNORA58B-201ENST00000364259 136 ntBASIC5.46□□□□□ -1.54
LTBQ06643 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 GCNT6-201ENST00000379591 934 ntBASIC5.46□□□□□ -1.54
LTBQ06643 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LTBQ06643 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LTBQ06643 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LTBQ06643 RN7SKP216-201ENST00000411050 312 ntBASIC5.46□□□□□ -1.54
LTBQ06643 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 RPL35AP31-201ENST00000418340 337 ntBASIC5.46□□□□□ -1.54
LTBQ06643 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.46□□□□□ -1.54
LTBQ06643 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms