Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 AC092865.4-201ENST00000477936 615 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 EIF4E2P2-201ENST00000492033 736 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 RN7SL591P-201ENST00000496150 292 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 AC011411.1-201ENST00000509592 876 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 AC092709.1-201ENST00000521355 1045 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 EIF4A2P5-201ENST00000529914 499 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S2P59780 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 AC089984.3-201ENST00000552838 363 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 AC090607.5-201ENST00000615692 224 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 AC068213.1-201ENST00000625124 226 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S2P59780 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 Z83820.1-201ENST00000456978 1499 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 SCN1A-220ENST00000641603 12506 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S2P59780 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
AP3S2P59780 CDY3P-201ENST00000454543 1618 ntBASIC4.79□□□□□ -1.64
AP3S2P59780 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
AP3S2P59780 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 AL034549.2-201ENST00000618285 3373 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 SELENOWP1-201ENST00000322792 252 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 RNU1-134P-201ENST00000362935 165 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 RNA5SP427-201ENST00000365323 119 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP3S2P59780 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP3S2P59780 AC016739.1-201ENST00000405359 345 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AC007738.1-201ENST00000413892 348 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S2P59780 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 FAM183DP-201ENST00000421987 399 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 MTND6P12-201ENST00000428247 522 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S2P59780 AC090018.1-201ENST00000434369 367 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 RPL22P11-201ENST00000434894 385 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AL450263.2-201ENST00000439400 589 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AL136455.1-201ENST00000441083 1240 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AC090804.1-201ENST00000448870 490 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 RPS12P20-201ENST00000464109 380 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 RPS24P16-201ENST00000497294 392 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.78□□□□□ -1.64
AP3S2P59780 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S2P59780 AC021106.1-201ENST00000509020 1058 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 CR383658.1-201ENST00000514609 734 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S2P59780 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S2P59780 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 CHEK2P2-201ENST00000554701 672 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S2P59780 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S2P59780 AL021918.2-201ENST00000613415 194 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.78□□□□□ -1.64
AP3S2P59780 RFPL4AP6-201ENST00000616792 846 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.78□□□□□ -1.64
AP3S2P59780 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
AP3S2P59780 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 AC021242.1-201ENST00000507315 2035 ntBASIC4.78□□□□□ -1.64
AP3S2P59780 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S2P59780 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S2P59780 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
AP3S2P59780 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
AP3S2P59780 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.77□□□□□ -1.65
AP3S2P59780 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
AP3S2P59780 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
AP3S2P59780 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP3S2P59780 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
AP3S2P59780 AC100757.1-201ENST00000616872 1835 ntBASIC4.77□□□□□ -1.65
AP3S2P59780 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
AP3S2P59780 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
AP3S2P59780 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
AP3S2P59780 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
AP3S2P59780 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms