Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 RPS3P2-201ENST00000421346 701 ntBASIC5.35□□□□□ -1.55
CDH11P55287 NMD3P2-201ENST00000421815 761 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC007064.3-201ENST00000422608 359 ntBASIC5.35□□□□□ -1.55
CDH11P55287 CRIP1P1-201ENST00000427567 185 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH11P55287 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 AC099670.2-201ENST00000435130 321 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 AC016027.4-201ENST00000450866 277 ntBASIC5.35□□□□□ -1.55
CDH11P55287 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH11P55287 RPL31P53-201ENST00000457065 348 ntBASIC5.35□□□□□ -1.55
CDH11P55287 PFN1P6-201ENST00000476786 399 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC025458.1-201ENST00000506046 166 ntBASIC5.35□□□□□ -1.55
CDH11P55287 COL6A4P2-205ENST00000509855 506 ntBASIC5.35□□□□□ -1.55
CDH11P55287 ASNSP4-201ENST00000511103 447 ntBASIC5.35□□□□□ -1.55
CDH11P55287 CR383658.1-201ENST00000514609 734 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.35□□□□□ -1.55
CDH11P55287 KCTD9P6-201ENST00000522306 950 ntBASIC5.35□□□□□ -1.55
CDH11P55287 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH11P55287 IGKV2-4-201ENST00000523070 340 ntBASIC5.35□□□□□ -1.55
CDH11P55287 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC021269.1-201ENST00000526860 705 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH11P55287 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDH11P55287 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH11P55287 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 AC126615.2-201ENST00000553003 515 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH11P55287 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH11P55287 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH11P55287 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH11P55287 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 VN1R81P-201ENST00000602085 372 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AL513327.3-201ENST00000602618 469 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH11P55287 AC073575.2-201ENST00000614212 627 ntBASIC5.35□□□□□ -1.55
CDH11P55287 RNA5SP439-201ENST00000617595 124 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC245014.3-201ENST00000618589 347 ntBASIC5.35□□□□□ -1.55
CDH11P55287 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH11P55287 AC020763.5-201ENST00000623298 430 ntBASIC5.35□□□□□ -1.55
CDH11P55287 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
CDH11P55287 RNA5SP110-201ENST00000362638 115 ntBASIC5.34□□□□□ -1.55
CDH11P55287 HMGN1P20-201ENST00000411849 300 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AL096829.1-201ENST00000413677 457 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AL158827.1-201ENST00000416300 391 ntBASIC5.34□□□□□ -1.55
CDH11P55287 RPL12P43-201ENST00000420608 499 ntBASIC5.34□□□□□ -1.55
CDH11P55287 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 IPPKP1-201ENST00000422501 768 ntBASIC5.34□□□□□ -1.55
CDH11P55287 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 RPS29P14-201ENST00000431518 171 ntBASIC5.34□□□□□ -1.55
CDH11P55287 MTCO1P57-201ENST00000432182 261 ntBASIC5.34□□□□□ -1.55
CDH11P55287 MTCO3P43-201ENST00000440974 771 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AC104164.1-201ENST00000460282 590 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 AC083795.1-201ENST00000491760 320 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH11P55287 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 RNU6-1334P-201ENST00000516032 105 ntBASIC5.34□□□□□ -1.55
CDH11P55287 RNA5SP434-201ENST00000516647 121 ntBASIC5.34□□□□□ -1.55
CDH11P55287 RNU6-467P-201ENST00000517027 110 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms