Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.42□□□□□ -1.54
GTF2A1P52655 DYNLL1P1-201ENST00000595442 269 ntBASIC5.42□□□□□ -1.54
GTF2A1P52655 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.42□□□□□ -1.54
GTF2A1P52655 AL031429.2-201ENST00000602605 649 ntBASIC5.42□□□□□ -1.54
GTF2A1P52655 AC012175.1-201ENST00000603755 531 ntBASIC5.42□□□□□ -1.54
GTF2A1P52655 AL356608.1-201ENST00000610034 820 ntBASIC5.42□□□□□ -1.54
GTF2A1P52655 uc_338.18-201ENST00000615451 175 ntBASIC5.42□□□□□ -1.54
GTF2A1P52655 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GTF2A1P52655 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.42□□□□□ -1.54
GTF2A1P52655 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
GTF2A1P52655 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.42□□□□□ -1.54
GTF2A1P52655 AC006453.3-201ENST00000635891 377 ntBASIC5.42□□□□□ -1.54
GTF2A1P52655 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.42□□□□□ -1.54
GTF2A1P52655 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GTF2A1P52655 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GTF2A1P52655 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.42□□□□□ -1.54
GTF2A1P52655 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
GTF2A1P52655 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
GTF2A1P52655 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GTF2A1P52655 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
GTF2A1P52655 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.42□□□□□ -1.54
GTF2A1P52655 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
GTF2A1P52655 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.41□□□□□ -1.54
GTF2A1P52655 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC027088.4-201ENST00000611559 1947 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.41□□□□□ -1.54
GTF2A1P52655 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.41□□□□□ -1.54
GTF2A1P52655 Y_RNA.209-201ENST00000364156 111 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 MIR301B-201ENST00000390813 78 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 SNORA48.4-201ENST00000391089 134 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 SNORA79B-201ENST00000410557 148 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 Z93019.1-201ENST00000416450 973 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 PTPN2P1-201ENST00000423212 1072 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 RPS12P5-201ENST00000423449 371 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 PRUNEP1-201ENST00000425846 705 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AC073465.2-201ENST00000440938 498 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC090804.1-201ENST00000448870 490 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.41□□□□□ -1.54
GTF2A1P52655 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC105391.1-201ENST00000503155 1045 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC008868.1-201ENST00000509786 737 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.41□□□□□ -1.54
GTF2A1P52655 RNA5SP418-201ENST00000515951 117 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 FCGR1CP-201ENST00000579737 1127 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AL137072.1-201ENST00000603444 466 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AC004839.1-201ENST00000610269 501 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 AC027506.1-201ENST00000621395 198 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AP003108.4-201ENST00000623917 878 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 AP000648.2-201ENST00000624182 404 ntBASIC5.41□□□□□ -1.54
GTF2A1P52655 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF2A1P52655 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.41□□□□□ -1.54
GTF2A1P52655 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF2A1P52655 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.4□□□□□ -1.54
GTF2A1P52655 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
GTF2A1P52655 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
GTF2A1P52655 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 KPNA2P2-201ENST00000419546 1489 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GTF2A1P52655 AC019178.1-201ENST00000392337 440 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 AL353133.1-201ENST00000407695 401 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 RNA5SP146-201ENST00000410743 123 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.4□□□□□ -1.54
GTF2A1P52655 AC073136.2-201ENST00000417282 849 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.4□□□□□ -1.54
GTF2A1P52655 EIF4A1P1-201ENST00000420241 934 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 OR2X1P-201ENST00000421144 687 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.4□□□□□ -1.54
GTF2A1P52655 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GTF2A1P52655 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.4□□□□□ -1.54
GTF2A1P52655 RPL19P16-201ENST00000433839 588 ntBASIC5.4□□□□□ -1.54
GTF2A1P52655 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms