Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RN7SL473P-201ENST00000580341 299 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF144AP50876 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF144AP50876 OR4F8P-201ENST00000589943 937 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 AC012507.3-201ENST00000603556 477 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF144AP50876 AC112191.3-201ENST00000604371 277 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF144AP50876 MIR6732-201ENST00000619365 60 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 AC134981.1-201ENST00000628076 348 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF144AP50876 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF144AP50876 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF144AP50876 XRCC6P2-201ENST00000457831 1822 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RNF144AP50876 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF144AP50876 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF144AP50876 MFSD8-227ENST00000641393 4069 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.28□□□□□ -1.24
RNF144AP50876 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF144AP50876 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF144AP50876 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF144AP50876 AC126773.4-201ENST00000612545 3043 ntBASIC7.27□□□□□ -1.24
RNF144AP50876 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
RNF144AP50876 AC114786.2-201ENST00000510090 1426 ntBASIC7.27□□□□□ -1.24
RNF144AP50876 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
RNF144AP50876 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.27□□□□□ -1.24
RNF144AP50876 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 AC015689.2-201ENST00000528172 1738 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF144AP50876 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF144AP50876 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 Y_RNA.422-201ENST00000384054 114 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 RNU6-1103P-201ENST00000384150 107 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 RNU4-31P-201ENST00000384211 141 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RNF144AP50876 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AL355375.1-201ENST00000405686 392 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 DNAJB5P1-201ENST00000454004 806 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC096741.1-201ENST00000472250 846 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AL122013.1-201ENST00000473054 801 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 RPL35P6-201ENST00000490024 372 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.27□□□□□ -1.25
RNF144AP50876 AP005597.4-201ENST00000526762 229 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AP003122.4-201ENST00000530980 758 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF144AP50876 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC025260.1-201ENST00000548858 430 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF144AP50876 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF144AP50876 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 RN7SL123P-201ENST00000577239 292 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC009977.1-201ENST00000586015 570 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AL162413.1-201ENST00000603198 110 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 PRELID3BP8-201ENST00000604148 295 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC018695.5-201ENST00000605872 315 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC093788.1-201ENST00000609356 927 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 SNORD91A-202ENST00000609620 191 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC103974.2-201ENST00000611319 778 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC123788.2-201ENST00000612290 283 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 pRNA.12-201ENST00000614353 90 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 pRNA.3-201ENST00000615048 90 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 AC139792.3-201ENST00000623525 224 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF144AP50876 AL353795.1-201ENST00000439134 1775 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC7.27□□□□□ -1.25
RNF144AP50876 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RNF144AP50876 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 OR52B5P-204ENST00000641744 3467 ntBASIC7.27□□□□□ -1.25
RNF144AP50876 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF144AP50876 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF144AP50876 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms