Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.06□□□□□ -1.44
CASP4P49662 BX276092.8-201ENST00000455722 250 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AC128716.1-201ENST00000475129 166 ntBASIC6.06□□□□□ -1.44
CASP4P49662 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 GLUD1P3-202ENST00000508551 200 ntBASIC6.06□□□□□ -1.44
CASP4P49662 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.06□□□□□ -1.44
CASP4P49662 MTATP6P1-201ENST00000514057 681 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.06□□□□□ -1.44
CASP4P49662 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.06□□□□□ -1.44
CASP4P49662 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.06□□□□□ -1.44
CASP4P49662 AL583832.1-201ENST00000603227 784 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AC009237.12-201ENST00000604755 742 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AC008115.3-201ENST00000614874 549 ntBASIC6.06□□□□□ -1.44
CASP4P49662 SNORA11.6-201ENST00000619030 128 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AC127024.6-201ENST00000621598 424 ntBASIC6.06□□□□□ -1.44
CASP4P49662 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AL512356.3-201ENST00000623005 461 ntBASIC6.06□□□□□ -1.44
CASP4P49662 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 AC103703.1-201ENST00000634783 663 ntBASIC6.06□□□□□ -1.44
CASP4P49662 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CASP4P49662 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CASP4P49662 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.05□□□□□ -1.44
CASP4P49662 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 AC083899.1-201ENST00000454465 3819 ntBASIC6.05□□□□□ -1.44
CASP4P49662 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CASP4P49662 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
CASP4P49662 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 CDY17P-201ENST00000414121 1282 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 BMS1P17-202ENST00000416720 316 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 AC104843.2-201ENST00000427666 297 ntBASIC6.05□□□□□ -1.44
CASP4P49662 RPL7P56-201ENST00000429441 717 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.05□□□□□ -1.44
CASP4P49662 OR6D1P-201ENST00000436165 939 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AC002504.1-201ENST00000438281 691 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AC019185.1-201ENST00000442718 389 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.05□□□□□ -1.44
CASP4P49662 GTF2IP11-201ENST00000526931 420 ntBASIC6.05□□□□□ -1.44
CASP4P49662 IGBP1P1-201ENST00000554337 1009 ntBASIC6.05□□□□□ -1.44
CASP4P49662 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 HMGN2P47-201ENST00000559378 272 ntBASIC6.05□□□□□ -1.44
CASP4P49662 OOSP1P2-201ENST00000579644 351 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AC023389.2-201ENST00000580031 955 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 RNA5SP440-201ENST00000612665 119 ntBASIC6.05□□□□□ -1.44
CASP4P49662 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.05□□□□□ -1.44
CASP4P49662 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CASP4P49662 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.05□□□□□ -1.44
CASP4P49662 AL137141.1-201ENST00000624622 4836 ntBASIC6.05□□□□□ -1.44
CASP4P49662 AC099654.3-201ENST00000447087 1546 ntBASIC6.04□□□□□ -1.44
CASP4P49662 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CASP4P49662 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CASP4P49662 AP000432.2-201ENST00000624164 2048 ntBASIC6.04□□□□□ -1.44
CASP4P49662 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.04□□□□□ -1.44
CASP4P49662 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.04□□□□□ -1.44
CASP4P49662 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CASP4P49662 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CASP4P49662 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CASP4P49662 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CASP4P49662 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.04□□□□□ -1.44
CASP4P49662 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CASP4P49662 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CASP4P49662 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.04□□□□□ -1.44
CASP4P49662 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CASP4P49662 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CASP4P49662 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CASP4P49662 SNORA16A-201ENST00000384342 137 ntBASIC6.04□□□□□ -1.44
CASP4P49662 U3.28-201ENST00000391249 210 ntBASIC6.04□□□□□ -1.44
CASP4P49662 GABARAPL3-201ENST00000412799 354 ntBASIC6.04□□□□□ -1.44
CASP4P49662 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.04□□□□□ -1.44
CASP4P49662 NDUFB4P8-201ENST00000435351 367 ntBASIC6.04□□□□□ -1.44
CASP4P49662 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.04□□□□□ -1.44
CASP4P49662 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CASP4P49662 YWHAEP1-201ENST00000453697 763 ntBASIC6.04□□□□□ -1.44
CASP4P49662 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.04□□□□□ -1.44
CASP4P49662 PPIAP19-201ENST00000486414 492 ntBASIC6.04□□□□□ -1.44
CASP4P49662 AC074087.1-201ENST00000512059 724 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms