Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC008173.1-201ENST00000418901 264 ntBASIC5.37□□□□□ -1.55
SOX2P48431 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX2P48431 SOCS5P1-201ENST00000440415 949 ntBASIC5.37□□□□□ -1.55
SOX2P48431 MTCO1P53-201ENST00000441633 699 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 EIF2S2P2-201ENST00000447161 982 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 RN7SL372P-201ENST00000461982 298 ntBASIC5.37□□□□□ -1.55
SOX2P48431 MTCO2P6-201ENST00000463134 685 ntBASIC5.37□□□□□ -1.55
SOX2P48431 METTL15P1-201ENST00000481421 1045 ntBASIC5.37□□□□□ -1.55
SOX2P48431 RPL7AP30-201ENST00000482859 796 ntBASIC5.37□□□□□ -1.55
SOX2P48431 PPP1R11P1-201ENST00000486095 376 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.37□□□□□ -1.55
SOX2P48431 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX2P48431 AC133963.2-201ENST00000513686 578 ntBASIC5.37□□□□□ -1.55
SOX2P48431 RFPL4AP3-201ENST00000515267 345 ntBASIC5.37□□□□□ -1.55
SOX2P48431 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 IGHV4-55-201ENST00000520889 368 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX2P48431 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 OR6M2P-201ENST00000529831 871 ntBASIC5.37□□□□□ -1.55
SOX2P48431 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 AC023080.1-201ENST00000551663 931 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 OR4C49P-201ENST00000563891 900 ntBASIC5.37□□□□□ -1.55
SOX2P48431 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.37□□□□□ -1.55
SOX2P48431 DYNLL1P1-201ENST00000595442 269 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC022022.2-201ENST00000602989 360 ntBASIC5.37□□□□□ -1.55
SOX2P48431 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC025811.1-201ENST00000604312 472 ntBASIC5.37□□□□□ -1.55
SOX2P48431 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 AC093673.2-201ENST00000609674 331 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 Z99129.2-201ENST00000619967 314 ntBASIC5.37□□□□□ -1.55
SOX2P48431 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 AC132825.7-201ENST00000638744 335 ntBASIC5.37□□□□□ -1.55
SOX2P48431 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SOX2P48431 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 AC093297.3-201ENST00000607056 2517 ntBASIC5.37□□□□□ -1.55
SOX2P48431 MTCO1P28-201ENST00000574177 1528 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX2P48431 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX2P48431 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SOX2P48431 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 MTHFD2P5-201ENST00000320415 844 ntBASIC5.36□□□□□ -1.55
SOX2P48431 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 RNU1-5P-201ENST00000362684 144 ntBASIC5.36□□□□□ -1.55
SOX2P48431 RNA5SP375-201ENST00000362975 119 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.36□□□□□ -1.55
SOX2P48431 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SOX2P48431 TAS2R15P-201ENST00000390674 928 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL121977.1-201ENST00000401636 979 ntBASIC5.36□□□□□ -1.55
SOX2P48431 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 OR51B3P-201ENST00000412287 913 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 CBX1P3-201ENST00000413296 527 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL445183.3-201ENST00000414168 502 ntBASIC5.36□□□□□ -1.55
SOX2P48431 HIGD1AP15-201ENST00000416198 280 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 VPS26BP1-201ENST00000417155 755 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 RPS7P14-201ENST00000426405 583 ntBASIC5.36□□□□□ -1.55
SOX2P48431 DEFB130D-201ENST00000426866 237 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC092634.2-201ENST00000428146 1010 ntBASIC5.36□□□□□ -1.55
SOX2P48431 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms