Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 AC023632.6-201ENST00000624338 2177 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD4P46934 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NEDD4P46934 RNA5SP132-201ENST00000364725 118 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD4P46934 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 AC009963.4-201ENST00000448535 339 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 AC100832.1-201ENST00000471945 383 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 UBA52P7-201ENST00000486088 380 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 RN7SL184P-201ENST00000488308 297 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 RN7SL547P-201ENST00000490793 290 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD4P46934 OR8Q1P-201ENST00000526467 655 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD4P46934 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD4P46934 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.51□□□□□ -1.37
NEDD4P46934 AP005403.1-201ENST00000579720 229 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD4P46934 AC007204.2-201ENST00000615022 616 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD4P46934 MIR4302-201ENST00000638058 60 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 AP001153.1-201ENST00000641024 338 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD4P46934 ADAM24P-201ENST00000398655 2101 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD4P46934 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NEDD4P46934 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD4P46934 AC092451.3-201ENST00000625067 1343 ntBASIC6.51□□□□□ -1.37
NEDD4P46934 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NEDD4P46934 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD4P46934 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD4P46934 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD4P46934 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD4P46934 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD4P46934 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
NEDD4P46934 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 RN7SKP145-201ENST00000363291 303 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NEDD4P46934 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NEDD4P46934 MTND2P40-201ENST00000436718 841 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD4P46934 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL136038.1-201ENST00000497246 351 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AC090638.1-201ENST00000498296 909 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AC021106.1-201ENST00000509020 1058 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AC084824.2-201ENST00000548906 345 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AC015720.2-201ENST00000567709 334 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 AC000068.2-201ENST00000608816 460 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 AL591135.1-201ENST00000401578 5914 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL353796.1-201ENST00000561542 3241 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD4P46934 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 RN7SKP6-201ENST00000364795 319 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD4P46934 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL121776.1-201ENST00000429337 372 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 RPL7P56-201ENST00000429441 717 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD4P46934 LINC02210-201ENST00000444561 288 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD4P46934 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL035090.1-201ENST00000454835 332 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD4P46934 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD4P46934 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD4P46934 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.5□□□□□ -1.37
NEDD4P46934 AC027026.1-201ENST00000532323 742 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.5□□□□□ -1.37
NEDD4P46934 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NEDD4P46934 ADAM3B-201ENST00000569937 840 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD4P46934 SUGT1P3-202ENST00000604259 383 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 AL359513.1-201ENST00000614364 557 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 MIR6886-201ENST00000619864 61 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 MIR8080-201ENST00000622224 89 ntBASIC6.5□□□□□ -1.37
NEDD4P46934 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD4P46934 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms