Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 ABCA11P-202ENST00000504019 2110 ntBASIC7.06□□□□□ -1.28
RFC4P35249 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 MIR133B-201ENST00000362210 119 ntBASIC7.06□□□□□ -1.28
RFC4P35249 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.06□□□□□ -1.28
RFC4P35249 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RFC4P35249 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RFC4P35249 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.06□□□□□ -1.28
RFC4P35249 AC007568.1-201ENST00000422912 471 ntBASIC7.06□□□□□ -1.28
RFC4P35249 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.06□□□□□ -1.28
RFC4P35249 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.06□□□□□ -1.28
RFC4P35249 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.06□□□□□ -1.28
RFC4P35249 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.06□□□□□ -1.28
RFC4P35249 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.06□□□□□ -1.28
RFC4P35249 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.06□□□□□ -1.28
RFC4P35249 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.06□□□□□ -1.28
RFC4P35249 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.06□□□□□ -1.28
RFC4P35249 ELOCP28-201ENST00000590044 317 ntBASIC7.06□□□□□ -1.28
RFC4P35249 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.06□□□□□ -1.28
RFC4P35249 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.06□□□□□ -1.28
RFC4P35249 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.06□□□□□ -1.28
RFC4P35249 LINC01739-205ENST00000641890 573 ntBASIC7.06□□□□□ -1.28
RFC4P35249 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.06□□□□□ -1.28
RFC4P35249 ZNF658B-201ENST00000602828 3408 ntBASIC7.06□□□□□ -1.28
RFC4P35249 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.06□□□□□ -1.28
RFC4P35249 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFC4P35249 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
RFC4P35249 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RFC4P35249 AL591135.1-201ENST00000401578 5914 ntBASIC7.05□□□□□ -1.28
RFC4P35249 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RFC4P35249 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 MFSD8-239ENST00000641590 2479 ntBASIC7.05□□□□□ -1.28
RFC4P35249 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RFC4P35249 AL360271.1-201ENST00000395679 510 ntBASIC7.05□□□□□ -1.28
RFC4P35249 U3.36-201ENST00000408418 213 ntBASIC7.05□□□□□ -1.28
RFC4P35249 AC015977.1-201ENST00000418887 292 ntBASIC7.05□□□□□ -1.28
RFC4P35249 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.05□□□□□ -1.28
RFC4P35249 AC023818.1-201ENST00000498379 384 ntBASIC7.05□□□□□ -1.28
RFC4P35249 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.05□□□□□ -1.28
RFC4P35249 AC110775.1-201ENST00000513721 462 ntBASIC7.05□□□□□ -1.28
RFC4P35249 HMGB1P40-201ENST00000525121 540 ntBASIC7.05□□□□□ -1.28
RFC4P35249 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.05□□□□□ -1.28
RFC4P35249 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.05□□□□□ -1.28
RFC4P35249 RBM22P1-201ENST00000578589 1214 ntBASIC7.05□□□□□ -1.28
RFC4P35249 AC011840.5-201ENST00000582125 771 ntBASIC7.05□□□□□ -1.28
RFC4P35249 MIR4480-201ENST00000582492 71 ntBASIC7.05□□□□□ -1.28
RFC4P35249 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.05□□□□□ -1.28
RFC4P35249 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.05□□□□□ -1.28
RFC4P35249 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RFC4P35249 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.05□□□□□ -1.28
RFC4P35249 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.05□□□□□ -1.28
RFC4P35249 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
RFC4P35249 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 AC022034.1-201ENST00000512867 2156 ntBASIC7.05□□□□□ -1.28
RFC4P35249 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFC4P35249 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.04□□□□□ -1.28
RFC4P35249 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RFC4P35249 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.04□□□□□ -1.28
RFC4P35249 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.04□□□□□ -1.28
RFC4P35249 TMA16P2-201ENST00000413187 601 ntBASIC7.04□□□□□ -1.28
RFC4P35249 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.04□□□□□ -1.28
RFC4P35249 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.04□□□□□ -1.28
RFC4P35249 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.04□□□□□ -1.28
RFC4P35249 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.04□□□□□ -1.28
RFC4P35249 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.04□□□□□ -1.28
RFC4P35249 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.04□□□□□ -1.28
RFC4P35249 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.04□□□□□ -1.28
RFC4P35249 AC137695.1-201ENST00000604126 489 ntBASIC7.04□□□□□ -1.28
RFC4P35249 AC074101.1-201ENST00000637861 241 ntBASIC7.04□□□□□ -1.28
RFC4P35249 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RFC4P35249 AL162456.1-201ENST00000634535 2006 ntBASIC7.04□□□□□ -1.28
RFC4P35249 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 ZNF101P1-201ENST00000435701 1720 ntBASIC7.04□□□□□ -1.28
RFC4P35249 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms