Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL445991.1-201ENST00000450381 475 ntBASIC5.9□□□□□ -1.46
CD40P25942 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.9□□□□□ -1.46
CD40P25942 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.9□□□□□ -1.46
CD40P25942 KF459542.1-201ENST00000450908 553 ntBASIC5.9□□□□□ -1.46
CD40P25942 AL606490.1-201ENST00000452266 765 ntBASIC5.9□□□□□ -1.46
CD40P25942 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.9□□□□□ -1.46
CD40P25942 RN7SL83P-201ENST00000468131 297 ntBASIC5.9□□□□□ -1.46
CD40P25942 RPS3AP49-201ENST00000472161 790 ntBASIC5.9□□□□□ -1.46
CD40P25942 SYPL1P1-201ENST00000473622 768 ntBASIC5.9□□□□□ -1.46
CD40P25942 TRBV8-2-201ENST00000475637 270 ntBASIC5.9□□□□□ -1.46
CD40P25942 RN7SL187P-201ENST00000495587 303 ntBASIC5.9□□□□□ -1.46
CD40P25942 RN7SL143P-201ENST00000496780 297 ntBASIC5.9□□□□□ -1.46
CD40P25942 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.9□□□□□ -1.46
CD40P25942 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CD40P25942 NACAP5-201ENST00000509863 636 ntBASIC5.9□□□□□ -1.46
CD40P25942 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CD40P25942 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.9□□□□□ -1.46
CD40P25942 RN7SKP196-201ENST00000516267 345 ntBASIC5.9□□□□□ -1.46
CD40P25942 SNRPCP6-201ENST00000528310 210 ntBASIC5.9□□□□□ -1.46
CD40P25942 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CD40P25942 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CD40P25942 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.9□□□□□ -1.46
CD40P25942 OR5BK1P-201ENST00000550421 823 ntBASIC5.9□□□□□ -1.46
CD40P25942 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.9□□□□□ -1.46
CD40P25942 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CD40P25942 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.9□□□□□ -1.46
CD40P25942 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.9□□□□□ -1.46
CD40P25942 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.9□□□□□ -1.46
CD40P25942 DUXAP11-201ENST00000603858 526 ntBASIC5.9□□□□□ -1.46
CD40P25942 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.9□□□□□ -1.46
CD40P25942 AL139418.1-201ENST00000613613 177 ntBASIC5.9□□□□□ -1.46
CD40P25942 AC122133.1-201ENST00000613964 233 ntBASIC5.9□□□□□ -1.46
CD40P25942 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CD40P25942 AC121761.2-201ENST00000617300 689 ntBASIC5.9□□□□□ -1.46
CD40P25942 AC006840.1-201ENST00000623069 542 ntBASIC5.9□□□□□ -1.46
CD40P25942 AL359757.1-201ENST00000623176 255 ntBASIC5.9□□□□□ -1.46
CD40P25942 AC005514.1-201ENST00000623521 208 ntBASIC5.9□□□□□ -1.46
CD40P25942 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.9□□□□□ -1.46
CD40P25942 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.9□□□□□ -1.46
CD40P25942 AC007603.3-201ENST00000636915 979 ntBASIC5.9□□□□□ -1.46
CD40P25942 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CD40P25942 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CD40P25942 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CD40P25942 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC5.9□□□□□ -1.47
CD40P25942 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 AP000776.1-201ENST00000530032 1663 ntBASIC5.9□□□□□ -1.47
CD40P25942 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC5.9□□□□□ -1.47
CD40P25942 MTND4P31-201ENST00000425607 1343 ntBASIC5.9□□□□□ -1.47
CD40P25942 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.9□□□□□ -1.47
CD40P25942 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC5.9□□□□□ -1.47
CD40P25942 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CD40P25942 AC034111.1-201ENST00000562143 3770 ntBASIC5.9□□□□□ -1.47
CD40P25942 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 IMMTP1-201ENST00000435590 2219 ntBASIC5.9□□□□□ -1.47
CD40P25942 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CD40P25942 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
CD40P25942 TMC3-AS1-206ENST00000612811 2726 ntBASIC5.9□□□□□ -1.47
CD40P25942 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.9□□□□□ -1.47
CD40P25942 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AC138915.4-201ENST00000565549 4147 ntBASIC5.89□□□□□ -1.47
CD40P25942 AC003973.3-201ENST00000624863 2822 ntBASIC5.89□□□□□ -1.47
CD40P25942 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 AC093311.1-201ENST00000506586 2021 ntBASIC5.89□□□□□ -1.47
CD40P25942 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CD40P25942 AC010894.1-201ENST00000313760 361 ntBASIC5.89□□□□□ -1.47
CD40P25942 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 RNU4-24P-201ENST00000364565 139 ntBASIC5.89□□□□□ -1.47
CD40P25942 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 SNORA7A-201ENST00000384765 139 ntBASIC5.89□□□□□ -1.47
CD40P25942 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CD40P25942 RPL9P21-201ENST00000392269 505 ntBASIC5.89□□□□□ -1.47
CD40P25942 FDPSP5-201ENST00000399474 1057 ntBASIC5.89□□□□□ -1.47
CD40P25942 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 CYCSP17-201ENST00000407870 315 ntBASIC5.89□□□□□ -1.47
CD40P25942 SNORA11C-201ENST00000408532 129 ntBASIC5.89□□□□□ -1.47
CD40P25942 RN7SKP59-201ENST00000410520 314 ntBASIC5.89□□□□□ -1.47
CD40P25942 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms