Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.28□□□□□ -1.4
ATF4P18848 AL020997.1-201ENST00000446554 349 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RPS23P9-201ENST00000448848 438 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AL365436.1-201ENST00000452587 495 ntBASIC6.28□□□□□ -1.4
ATF4P18848 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 AL109809.3-201ENST00000456875 246 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC006511.1-201ENST00000470614 315 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RN7SL77P-201ENST00000473332 294 ntBASIC6.28□□□□□ -1.4
ATF4P18848 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 AC068522.1-201ENST00000482895 345 ntBASIC6.28□□□□□ -1.4
ATF4P18848 HMGN2P25-201ENST00000486956 268 ntBASIC6.28□□□□□ -1.4
ATF4P18848 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 Z99943.2-201ENST00000507585 266 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 OR7E85P-201ENST00000512164 985 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC022447.1-201ENST00000515358 464 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RNU6-583P-201ENST00000516012 92 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RNA5SP460-201ENST00000516789 100 ntBASIC6.28□□□□□ -1.4
ATF4P18848 SNORA81.2-201ENST00000516868 170 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RN7SKP197-201ENST00000517077 297 ntBASIC6.28□□□□□ -1.4
ATF4P18848 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.28□□□□□ -1.4
ATF4P18848 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.28□□□□□ -1.4
ATF4P18848 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.28□□□□□ -1.4
ATF4P18848 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
ATF4P18848 AP002963.1-201ENST00000530590 184 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC022880.1-201ENST00000534017 973 ntBASIC6.28□□□□□ -1.4
ATF4P18848 SAA3P-202ENST00000534768 642 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 AC034102.1-201ENST00000552016 604 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 AL109628.1-201ENST00000556877 366 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 HLA-P-207ENST00000568192 747 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC025198.1-201ENST00000578331 419 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 AC090181.2-201ENST00000602975 672 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC011891.2-201ENST00000604949 397 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC004492.1-201ENST00000607036 742 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AL121928.1-201ENST00000608017 521 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC106782.6-201ENST00000611264 512 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC025594.3-201ENST00000613068 790 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC010678.1-201ENST00000614118 713 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC007786.3-201ENST00000615154 596 ntBASIC6.28□□□□□ -1.4
ATF4P18848 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 AC012254.5-201ENST00000623573 478 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC025048.6-202ENST00000627667 438 ntBASIC6.28□□□□□ -1.4
ATF4P18848 MIR3191-201ENST00000636300 76 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC099654.6-201ENST00000636487 512 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATF4P18848 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATF4P18848 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.28□□□□□ -1.4
ATF4P18848 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 CR383658.2-201ENST00000547576 1525 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AL079343.1-201ENST00000572358 1771 ntBASIC6.28□□□□□ -1.4
ATF4P18848 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATF4P18848 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.28□□□□□ -1.4
ATF4P18848 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 AC015689.2-201ENST00000528172 1738 ntBASIC6.28□□□□□ -1.4
ATF4P18848 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
ATF4P18848 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.27□□□□□ -1.4
ATF4P18848 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATF4P18848 MTCO1P14-201ENST00000441695 1559 ntBASIC6.27□□□□□ -1.41
ATF4P18848 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.27□□□□□ -1.41
ATF4P18848 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ATF4P18848 AL034546.1-201ENST00000623740 3693 ntBASIC6.27□□□□□ -1.41
ATF4P18848 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATF4P18848 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.27□□□□□ -1.41
ATF4P18848 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ATF4P18848 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC6.27□□□□□ -1.41
ATF4P18848 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
ATF4P18848 AC069222.1-201ENST00000608028 3360 ntBASIC6.27□□□□□ -1.41
ATF4P18848 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
ATF4P18848 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
ATF4P18848 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.27□□□□□ -1.41
ATF4P18848 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ATF4P18848 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ATF4P18848 FO393411.1-201ENST00000325612 420 ntBASIC6.27□□□□□ -1.41
ATF4P18848 AL121657.1-201ENST00000327215 531 ntBASIC6.27□□□□□ -1.41
ATF4P18848 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATF4P18848 RNU5F-7P-201ENST00000363696 115 ntBASIC6.27□□□□□ -1.41
ATF4P18848 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.27□□□□□ -1.41
ATF4P18848 PCNAP3-201ENST00000397222 778 ntBASIC6.27□□□□□ -1.41
ATF4P18848 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms