Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC079841.1-201ENST00000481228 950 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 EIF3KP3-201ENST00000514461 639 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 OR5AZ1P-201ENST00000527448 943 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 AP004607.2-201ENST00000533949 322 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 OR1F2P-201ENST00000570470 933 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.2□□□□□ -1.42
COL11A1P12107 AC079414.3-201ENST00000612986 1090 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 AC091953.3-201ENST00000623220 236 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL11A1P12107 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 AC112255.1-201ENST00000624070 2493 ntBASIC6.19□□□□□ -1.42
COL11A1P12107 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 AL021877.2-201ENST00000624442 10684 ntBASIC6.19□□□□□ -1.42
COL11A1P12107 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 LINC02035-201ENST00000610128 5476 ntBASIC6.19□□□□□ -1.42
COL11A1P12107 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 RNA5SP87-201ENST00000384155 118 ntBASIC6.19□□□□□ -1.42
COL11A1P12107 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.19□□□□□ -1.42
COL11A1P12107 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.19□□□□□ -1.42
COL11A1P12107 MTND6P2-201ENST00000512226 524 ntBASIC6.19□□□□□ -1.42
COL11A1P12107 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.19□□□□□ -1.42
COL11A1P12107 MIR6820-201ENST00000611508 62 ntBASIC6.19□□□□□ -1.42
COL11A1P12107 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.19□□□□□ -1.42
COL11A1P12107 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.19□□□□□ -1.42
COL11A1P12107 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL11A1P12107 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.18□□□□□ -1.42
COL11A1P12107 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL11A1P12107 RN7SKP95-201ENST00000362860 303 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 RN7SKP103-201ENST00000363848 320 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 AL590762.4-201ENST00000425885 253 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.18□□□□□ -1.42
COL11A1P12107 RPS23P9-201ENST00000448848 438 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 MORF4L1P4-201ENST00000450245 976 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.18□□□□□ -1.42
COL11A1P12107 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 GAPDHP62-201ENST00000515313 990 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 SCARNA16.4-201ENST00000516956 187 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.18□□□□□ -1.42
COL11A1P12107 AC006116.3-201ENST00000592968 361 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 AC095055.1-201ENST00000603472 1113 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 AC087385.3-201ENST00000620477 187 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
COL11A1P12107 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.18□□□□□ -1.42
COL11A1P12107 AC006600.2-201ENST00000624834 2506 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL11A1P12107 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL11A1P12107 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 RNU1-59P-201ENST00000364829 162 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL11A1P12107 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.18□□□□□ -1.42
COL11A1P12107 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.18□□□□□ -1.42
COL11A1P12107 VN1R54P-201ENST00000435210 1049 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 CEACAMP7-201ENST00000444105 496 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.18□□□□□ -1.42
COL11A1P12107 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.18□□□□□ -1.42
COL11A1P12107 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.18□□□□□ -1.42
COL11A1P12107 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.18□□□□□ -1.42
COL11A1P12107 U1.25-201ENST00000614085 162 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.18□□□□□ -1.42
COL11A1P12107 U1.34-201ENST00000618578 162 ntBASIC6.18□□□□□ -1.42
COL11A1P12107 U1.31-201ENST00000620022 160 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms