Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TOP2AP11388 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 MIR105-1-201ENST00000385222 81 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC9.43□□□□□ -0.9
TOP2AP11388 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.43□□□□□ -0.9
TOP2AP11388 RPL34P20-201ENST00000442771 351 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AC092754.1-201ENST00000472975 479 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AP000797.2-201ENST00000475768 606 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AC090142.2-201ENST00000483263 416 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.43□□□□□ -0.9
TOP2AP11388 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC9.43□□□□□ -0.9
TOP2AP11388 AL671862.1-201ENST00000515851 349 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC9.43□□□□□ -0.9
TOP2AP11388 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC9.43□□□□□ -0.9
TOP2AP11388 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC9.43□□□□□ -0.9
TOP2AP11388 XIST-210ENST00000602863 775 ntTSL 3 BASIC9.43□□□□□ -0.9
TOP2AP11388 AC091905.4-201ENST00000623432 202 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC9.43□□□□□ -0.9
TOP2AP11388 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 AC016745.2-201ENST00000608834 3443 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 AL353796.1-201ENST00000561542 3241 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.43□□□□□ -0.9
TOP2AP11388 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 THAP12P4-201ENST00000528321 2266 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC9.43□□□□□ -0.9
TOP2AP11388 ATP5A1P4-201ENST00000556888 1605 ntBASIC9.43□□□□□ -0.9
TOP2AP11388 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOP2AP11388 AC068769.1-201ENST00000474767 2426 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOP2AP11388 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
TOP2AP11388 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC9.42□□□□□ -0.9
TOP2AP11388 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOP2AP11388 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC9.42□□□□□ -0.9
TOP2AP11388 RPL23AP17-201ENST00000401064 499 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 NUDT19P3-201ENST00000404698 555 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 AL590139.1-201ENST00000416267 400 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC9.42□□□□□ -0.9
TOP2AP11388 TEX41-205ENST00000431734 529 ntTSL 4 BASIC9.42□□□□□ -0.9
TOP2AP11388 RPS29P33-201ENST00000456717 146 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 RN7SL346P-201ENST00000491561 294 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC9.42□□□□□ -0.9
TOP2AP11388 AC015660.5-201ENST00000623238 564 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
TOP2AP11388 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOP2AP11388 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC9.42□□□□□ -0.9
TOP2AP11388 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TOP2AP11388 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOP2AP11388 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.42□□□□□ -0.9
TOP2AP11388 AC114774.1-201ENST00000507410 1770 ntBASIC9.42□□□□□ -0.9
TOP2AP11388 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
TOP2AP11388 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOP2AP11388 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC9.41□□□□□ -0.9
TOP2AP11388 OR51A1P-201ENST00000511110 946 ntBASIC9.41□□□□□ -0.9
TOP2AP11388 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC9.41□□□□□ -0.9
TOP2AP11388 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC008814.1-201ENST00000603797 406 ntBASIC9.41□□□□□ -0.9
TOP2AP11388 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC9.41□□□□□ -0.9
TOP2AP11388 ALB-220ENST00000621628 1606 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
TOP2AP11388 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOP2AP11388 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC9.41□□□□□ -0.9
TOP2AP11388 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.41□□□□□ -0.9
TOP2AP11388 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 IGBP1P3-201ENST00000447449 1000 ntBASIC9.41□□□□□ -0.9
TOP2AP11388 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.41□□□□□ -0.9
TOP2AP11388 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC9.41□□□□□ -0.9
TOP2AP11388 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC9.41□□□□□ -0.9
TOP2AP11388 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.41□□□□□ -0.9
TOP2AP11388 NOP10-202ENST00000557912 436 ntTSL 2 BASIC9.41□□□□□ -0.9
TOP2AP11388 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC9.41□□□□□ -0.9
TOP2AP11388 AC005084.1-201ENST00000605160 304 ntBASIC9.41□□□□□ -0.9
TOP2AP11388 AL022394.1-201ENST00000606979 292 ntBASIC9.41□□□□□ -0.9
TOP2AP11388 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
TOP2AP11388 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
TOP2AP11388 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
TOP2AP11388 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.4□□□□□ -0.9
TOP2AP11388 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
TOP2AP11388 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TOP2AP11388 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 269.8 ms