Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TPM1P09493 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TPM1P09493 PSG10P-201ENST00000501199 1500 ntBASIC6.15□□□□□ -1.42
TPM1P09493 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TPM1P09493 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM1P09493 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM1P09493 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TPM1P09493 RN7SKP146-201ENST00000410242 334 ntBASIC6.15□□□□□ -1.42
TPM1P09493 RN7SKP29-201ENST00000410957 272 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AL357752.1-201ENST00000412817 349 ntBASIC6.15□□□□□ -1.42
TPM1P09493 NFU1P1-201ENST00000413128 774 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.15□□□□□ -1.42
TPM1P09493 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TPM1P09493 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM1P09493 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM1P09493 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM1P09493 AC021193.1-201ENST00000511607 420 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.15□□□□□ -1.42
TPM1P09493 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TPM1P09493 RNU6-513P-201ENST00000516104 104 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.15□□□□□ -1.42
TPM1P09493 RPA2P1-201ENST00000556557 721 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.15□□□□□ -1.42
TPM1P09493 AC096996.1-201ENST00000563813 325 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AC127024.5-201ENST00000580085 462 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AC090236.2-201ENST00000587933 1101 ntBASIC6.15□□□□□ -1.42
TPM1P09493 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TPM1P09493 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM1P09493 uc_338.7-201ENST00000621834 124 ntBASIC6.15□□□□□ -1.42
TPM1P09493 AL136228.1-201ENST00000622221 319 ntBASIC6.15□□□□□ -1.42
TPM1P09493 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TPM1P09493 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.15□□□□□ -1.43
TPM1P09493 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
TPM1P09493 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TPM1P09493 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TPM1P09493 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
TPM1P09493 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.15□□□□□ -1.43
TPM1P09493 AC027088.4-201ENST00000611559 1947 ntBASIC6.15□□□□□ -1.43
TPM1P09493 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TPM1P09493 TCP1P3-201ENST00000414406 1498 ntBASIC6.15□□□□□ -1.43
TPM1P09493 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.15□□□□□ -1.43
TPM1P09493 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TPM1P09493 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TPM1P09493 AC019072.1-201ENST00000604535 1551 ntBASIC6.14□□□□□ -1.43
TPM1P09493 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.14□□□□□ -1.43
TPM1P09493 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.14□□□□□ -1.43
TPM1P09493 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.14□□□□□ -1.43
TPM1P09493 RPL7P56-201ENST00000429441 717 ntBASIC6.14□□□□□ -1.43
TPM1P09493 AC126120.1-201ENST00000431082 470 ntBASIC6.14□□□□□ -1.43
TPM1P09493 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.14□□□□□ -1.43
TPM1P09493 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.14□□□□□ -1.43
TPM1P09493 AC097463.1-201ENST00000447288 481 ntBASIC6.14□□□□□ -1.43
TPM1P09493 OR52E3P-201ENST00000452083 936 ntBASIC6.14□□□□□ -1.43
TPM1P09493 AC093166.4-201ENST00000457867 318 ntBASIC6.14□□□□□ -1.43
TPM1P09493 AC005165.2-201ENST00000466070 380 ntBASIC6.14□□□□□ -1.43
TPM1P09493 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.14□□□□□ -1.43
TPM1P09493 AC139365.2-201ENST00000517972 253 ntBASIC6.14□□□□□ -1.43
TPM1P09493 AC079064.1-201ENST00000528365 362 ntBASIC6.14□□□□□ -1.43
TPM1P09493 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.14□□□□□ -1.43
TPM1P09493 AC006272.2-201ENST00000594725 163 ntBASIC6.14□□□□□ -1.43
TPM1P09493 WBP1LP12-201ENST00000604449 331 ntBASIC6.14□□□□□ -1.43
TPM1P09493 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.14□□□□□ -1.43
TPM1P09493 AC015819.1-201ENST00000613588 663 ntBASIC6.14□□□□□ -1.43
TPM1P09493 AC026367.3-201ENST00000619032 590 ntBASIC6.14□□□□□ -1.43
TPM1P09493 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.14□□□□□ -1.43
TPM1P09493 AC073869.7-201ENST00000640874 297 ntBASIC6.14□□□□□ -1.43
TPM1P09493 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
TPM1P09493 PDZK1P1-202ENST00000425209 1350 ntBASIC6.14□□□□□ -1.43
TPM1P09493 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
TPM1P09493 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.14□□□□□ -1.43
TPM1P09493 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM1P09493 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.14□□□□□ -1.43
TPM1P09493 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.14□□□□□ -1.43
TPM1P09493 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM1P09493 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM1P09493 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
TPM1P09493 AC068870.1-201ENST00000563737 2455 ntBASIC6.13□□□□□ -1.43
TPM1P09493 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM1P09493 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM1P09493 RNA5SP279-201ENST00000365513 117 ntBASIC6.13□□□□□ -1.43
TPM1P09493 SNORD56.6-201ENST00000384569 71 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms