Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR551A-201ENST00000385042 96 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 AL133388.1-201ENST00000404509 287 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 RPL23AP18-201ENST00000416139 468 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.65□□□□□ -1.35
COL1A1P02452 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.65□□□□□ -1.35
COL1A1P02452 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.65□□□□□ -1.35
COL1A1P02452 AC073850.1-201ENST00000449243 255 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 HIGD1AP8-201ENST00000453927 274 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.65□□□□□ -1.35
COL1A1P02452 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.65□□□□□ -1.35
COL1A1P02452 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
COL1A1P02452 AC127381.1-201ENST00000555979 939 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL1A1P02452 AC090527.3-201ENST00000619041 548 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 HSPA8P18-201ENST00000439846 1928 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 AL353796.1-201ENST00000561542 3241 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.65□□□□□ -1.35
COL1A1P02452 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
COL1A1P02452 Z82209.2-201ENST00000623410 2012 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
COL1A1P02452 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL1A1P02452 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL1A1P02452 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL1A1P02452 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL1A1P02452 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.64□□□□□ -1.35
COL1A1P02452 MT-RNR2-201ENST00000387347 1559 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL1A1P02452 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.64□□□□□ -1.35
COL1A1P02452 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.64□□□□□ -1.35
COL1A1P02452 RPA2P2-201ENST00000419698 796 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.64□□□□□ -1.35
COL1A1P02452 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 AC015864.1-201ENST00000496512 544 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 OR4A6P-201ENST00000534364 970 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 MIR3691-201ENST00000578066 90 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 AP005403.1-201ENST00000579720 229 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.64□□□□□ -1.35
COL1A1P02452 CYP4F35P-202ENST00000636121 390 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.64□□□□□ -1.35
COL1A1P02452 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
COL1A1P02452 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL1A1P02452 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.64□□□□□ -1.35
COL1A1P02452 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL1A1P02452 AC131971.1-201ENST00000332881 1482 ntBASIC6.64□□□□□ -1.35
COL1A1P02452 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL1A1P02452 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.63□□□□□ -1.35
COL1A1P02452 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 RN7SKP6-201ENST00000364795 319 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 SNORA67-201ENST00000384423 137 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.63□□□□□ -1.35
COL1A1P02452 AL772161.1-201ENST00000439130 476 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 AC108161.1-201ENST00000461060 402 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 PDCL3P4-201ENST00000489621 720 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 AC109462.1-201ENST00000491087 368 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 RN7SKP99-201ENST00000517028 307 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 OR5AM1P-201ENST00000532136 1032 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.63□□□□□ -1.35
COL1A1P02452 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.63□□□□□ -1.35
COL1A1P02452 MIR4436B2-201ENST00000581415 91 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 MIR4436B1-201ENST00000583272 91 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 AC009237.13-201ENST00000603193 276 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 AL353729.2-201ENST00000605859 1249 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.63□□□□□ -1.35
COL1A1P02452 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.63□□□□□ -1.35
COL1A1P02452 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
COL1A1P02452 AC073365.1-203ENST00000641055 1992 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 AC107980.1-201ENST00000558671 3355 ntBASIC6.63□□□□□ -1.35
COL1A1P02452 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COL1A1P02452 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL1A1P02452 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.62□□□□□ -1.35
COL1A1P02452 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL1A1P02452 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL1A1P02452 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 RNGTTP1-201ENST00000420965 728 ntBASIC6.62□□□□□ -1.35
COL1A1P02452 AL590762.4-201ENST00000425885 253 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms