Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.83□□□□□ -1.32
MBD4O95243 RNA5SP362-201ENST00000516048 118 ntBASIC6.83□□□□□ -1.32
MBD4O95243 RN7SKP248-201ENST00000516278 305 ntBASIC6.83□□□□□ -1.32
MBD4O95243 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.83□□□□□ -1.32
MBD4O95243 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.83□□□□□ -1.32
MBD4O95243 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.83□□□□□ -1.32
MBD4O95243 IGBP1P1-201ENST00000554337 1009 ntBASIC6.83□□□□□ -1.32
MBD4O95243 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.83□□□□□ -1.32
MBD4O95243 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MBD4O95243 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.83□□□□□ -1.32
MBD4O95243 AL513327.3-201ENST00000602618 469 ntBASIC6.83□□□□□ -1.32
MBD4O95243 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.83□□□□□ -1.32
MBD4O95243 AC104695.2-201ENST00000605056 775 ntBASIC6.83□□□□□ -1.32
MBD4O95243 RNU6-84P-201ENST00000607737 102 ntBASIC6.83□□□□□ -1.32
MBD4O95243 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.83□□□□□ -1.32
MBD4O95243 AC090607.5-201ENST00000615692 224 ntBASIC6.83□□□□□ -1.32
MBD4O95243 CU639417.4-201ENST00000623928 207 ntBASIC6.83□□□□□ -1.32
MBD4O95243 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
MBD4O95243 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MBD4O95243 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MBD4O95243 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
MBD4O95243 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.83□□□□□ -1.32
MBD4O95243 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.83□□□□□ -1.32
MBD4O95243 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MBD4O95243 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MBD4O95243 AC114786.1-201ENST00000512892 1415 ntBASIC6.83□□□□□ -1.32
MBD4O95243 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MBD4O95243 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.83□□□□□ -1.32
MBD4O95243 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.82□□□□□ -1.32
MBD4O95243 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
MBD4O95243 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.82□□□□□ -1.32
MBD4O95243 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 RNA5SP131-201ENST00000365452 119 ntBASIC6.82□□□□□ -1.32
MBD4O95243 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.82□□□□□ -1.32
MBD4O95243 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.82□□□□□ -1.32
MBD4O95243 MIR323B-201ENST00000385269 82 ntBASIC6.82□□□□□ -1.32
MBD4O95243 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.82□□□□□ -1.32
MBD4O95243 AC113412.1-201ENST00000425840 504 ntBASIC6.82□□□□□ -1.32
MBD4O95243 AC092651.1-201ENST00000426110 312 ntBASIC6.82□□□□□ -1.32
MBD4O95243 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.82□□□□□ -1.32
MBD4O95243 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.82□□□□□ -1.32
MBD4O95243 MTND6P5-201ENST00000448266 512 ntBASIC6.82□□□□□ -1.32
MBD4O95243 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.82□□□□□ -1.32
MBD4O95243 AC087672.1-201ENST00000479876 766 ntBASIC6.82□□□□□ -1.32
MBD4O95243 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.82□□□□□ -1.32
MBD4O95243 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 AC126615.2-201ENST00000553003 515 ntBASIC6.82□□□□□ -1.32
MBD4O95243 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.82□□□□□ -1.32
MBD4O95243 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.82□□□□□ -1.32
MBD4O95243 RN7SL753P-201ENST00000581238 290 ntBASIC6.82□□□□□ -1.32
MBD4O95243 FO393422.1-201ENST00000603908 708 ntBASIC6.82□□□□□ -1.32
MBD4O95243 GMCL1P2-201ENST00000605230 823 ntBASIC6.82□□□□□ -1.32
MBD4O95243 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.82□□□□□ -1.32
MBD4O95243 OR7M1P-201ENST00000608946 533 ntBASIC6.82□□□□□ -1.32
MBD4O95243 AC008115.3-201ENST00000614874 549 ntBASIC6.82□□□□□ -1.32
MBD4O95243 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.82□□□□□ -1.32
MBD4O95243 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
MBD4O95243 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
MBD4O95243 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.82□□□□□ -1.32
MBD4O95243 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.82□□□□□ -1.32
MBD4O95243 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MBD4O95243 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.81□□□□□ -1.32
MBD4O95243 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
MBD4O95243 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
MBD4O95243 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
MBD4O95243 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
MBD4O95243 RNU6-891P-201ENST00000384280 111 ntBASIC6.81□□□□□ -1.32
MBD4O95243 RN7SKP293-201ENST00000411389 296 ntBASIC6.81□□□□□ -1.32
MBD4O95243 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.81□□□□□ -1.32
MBD4O95243 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.81□□□□□ -1.32
MBD4O95243 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.81□□□□□ -1.32
MBD4O95243 YY1P1-201ENST00000427625 668 ntBASIC6.81□□□□□ -1.32
MBD4O95243 RPL12P39-201ENST00000455456 496 ntBASIC6.81□□□□□ -1.32
MBD4O95243 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MBD4O95243 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.81□□□□□ -1.32
MBD4O95243 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.81□□□□□ -1.32
MBD4O95243 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.81□□□□□ -1.32
MBD4O95243 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.81□□□□□ -1.32
MBD4O95243 AL049872.1-201ENST00000556323 322 ntBASIC6.81□□□□□ -1.32
MBD4O95243 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms