Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 RN7SKP6-201ENST00000364795 319 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 RNU4-2-201ENST00000365668 141 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 AL391422.1-201ENST00000402155 436 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.69□□□□□ -1.5
KDELR3O43731 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.69□□□□□ -1.5
KDELR3O43731 AC007161.1-204ENST00000423039 460 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 NAP1L4P2-201ENST00000425958 899 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 AC021876.1-201ENST00000425959 359 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 RN7SL466P-201ENST00000497546 295 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 RPS17P5-201ENST00000498293 408 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.69□□□□□ -1.5
KDELR3O43731 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.69□□□□□ -1.5
KDELR3O43731 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.69□□□□□ -1.5
KDELR3O43731 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 AC084824.2-201ENST00000548906 345 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.69□□□□□ -1.5
KDELR3O43731 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 AL589674.2-201ENST00000604304 337 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 AC004477.3-201ENST00000614061 590 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 MIR4302-201ENST00000638058 60 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 AC232271.1-201ENST00000602455 2715 ntBASIC5.69□□□□□ -1.5
KDELR3O43731 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KDELR3O43731 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.68□□□□□ -1.5
KDELR3O43731 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KDELR3O43731 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.68□□□□□ -1.5
KDELR3O43731 RN7SKP124-201ENST00000364730 341 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 RN7SKP28-201ENST00000364770 305 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 RN7SKP17-201ENST00000411242 351 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.68□□□□□ -1.5
KDELR3O43731 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 OR6D1P-201ENST00000436165 939 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AL390119.1-201ENST00000440329 312 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC019185.1-201ENST00000442718 389 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.68□□□□□ -1.5
KDELR3O43731 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.68□□□□□ -1.5
KDELR3O43731 AC021733.2-201ENST00000518830 497 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC122688.1-201ENST00000541494 223 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.68□□□□□ -1.5
KDELR3O43731 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KDELR3O43731 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.68□□□□□ -1.5
KDELR3O43731 AC015720.2-201ENST00000567709 334 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.68□□□□□ -1.5
KDELR3O43731 AP001357.1-201ENST00000586304 1053 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.68□□□□□ -1.5
KDELR3O43731 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.68□□□□□ -1.5
KDELR3O43731 AL353729.2-201ENST00000605859 1249 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 FAM72A-208ENST00000607379 1139 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC093388.1-201ENST00000609166 430 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.68□□□□□ -1.5
KDELR3O43731 AL138960.1-201ENST00000613838 513 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 AC132068.1-201ENST00000623805 459 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.68□□□□□ -1.5
KDELR3O43731 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 AC068870.1-201ENST00000563737 2455 ntBASIC5.68□□□□□ -1.5
KDELR3O43731 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.68□□□□□ -1.5
KDELR3O43731 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDELR3O43731 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KDELR3O43731 AP000432.2-201ENST00000624164 2048 ntBASIC5.67□□□□□ -1.5
KDELR3O43731 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KDELR3O43731 RN7SKP269-201ENST00000365545 319 ntBASIC5.67□□□□□ -1.5
KDELR3O43731 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.67□□□□□ -1.5
KDELR3O43731 MIR143-201ENST00000385300 106 ntBASIC5.67□□□□□ -1.5
KDELR3O43731 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.67□□□□□ -1.5
KDELR3O43731 AL513325.1-201ENST00000417716 1034 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms