Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC00328-2P-201ENST00000436585 219 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK2O43353 AC092106.1-201ENST00000444291 373 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 IGBP1P3-201ENST00000447449 1000 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC005077.1-201ENST00000449226 375 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 RBMY2TP-201ENST00000451162 947 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.7□□□□□ -1.5
RIPK2O43353 RPS4XP17-201ENST00000479057 754 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC017007.3-201ENST00000479865 435 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 RN7SL570P-201ENST00000484405 292 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 EIF3LP3-201ENST00000495197 822 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AL158068.1-201ENST00000506116 616 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC108103.1-201ENST00000511286 446 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 GAPDHP71-201ENST00000511530 1003 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC138517.1-201ENST00000515724 568 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC020937.1-201ENST00000519677 1013 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC009879.1-201ENST00000520029 839 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK2O43353 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.7□□□□□ -1.5
RIPK2O43353 TRIM51DP-201ENST00000529746 596 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK2O43353 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.7□□□□□ -1.5
RIPK2O43353 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK2O43353 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.7□□□□□ -1.5
RIPK2O43353 AC135626.1-201ENST00000556983 435 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK2O43353 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.7□□□□□ -1.5
RIPK2O43353 WBP1LP12-201ENST00000604449 331 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIPK2O43353 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK2O43353 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK2O43353 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK2O43353 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK2O43353 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK2O43353 PWAR1-201ENST00000624188 2414 ntBASIC5.7□□□□□ -1.5
RIPK2O43353 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RIPK2O43353 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIPK2O43353 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK2O43353 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK2O43353 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK2O43353 AL078621.3-201ENST00000623707 2042 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK2O43353 RLIMP2-201ENST00000427891 1563 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK2O43353 RNU6-1320P-201ENST00000390838 107 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 RNU6-1269P-201ENST00000391139 107 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 SETP10-201ENST00000424368 814 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.69□□□□□ -1.5
RIPK2O43353 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.69□□□□□ -1.5
RIPK2O43353 OR52E3P-201ENST00000452083 936 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK2O43353 RNU6-599P-201ENST00000459383 107 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 RNU6-1193P-201ENST00000459461 107 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK2O43353 AC092709.1-201ENST00000521355 1045 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK2O43353 AP001804.2-201ENST00000533932 910 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 AL121839.1-201ENST00000556233 1185 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 NMNAT1P5-201ENST00000559657 841 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.69□□□□□ -1.5
RIPK2O43353 AC092332.1-201ENST00000563684 829 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 MRPL45P2-203ENST00000573318 473 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.69□□□□□ -1.5
RIPK2O43353 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.69□□□□□ -1.5
RIPK2O43353 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.69□□□□□ -1.5
RIPK2O43353 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK2O43353 AC067838.1-201ENST00000606064 577 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 RNU6-368P-201ENST00000620928 107 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 RNU6-538P-201ENST00000622329 107 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK2O43353 AL357140.4-201ENST00000636827 412 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK2O43353 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RIPK2O43353 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RIPK2O43353 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.69□□□□□ -1.5
RIPK2O43353 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK2O43353 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.69□□□□□ -1.5
RIPK2O43353 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK2O43353 AC011755.1-201ENST00000623763 2049 ntBASIC5.69□□□□□ -1.5
RIPK2O43353 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RIPK2O43353 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 ADAM5-202ENST00000399789 1942 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 AF287957.1-201ENST00000607368 1595 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RIPK2O43353 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 AC073136.1-201ENST00000449426 2884 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RIPK2O43353 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.68□□□□□ -1.5
RIPK2O43353 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 GAPDHP24-201ENST00000328713 983 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AL159987.1-201ENST00000347911 293 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RIPK2O43353 RNA5SP431-201ENST00000410312 120 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms