Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.28□□□□□ -1.56
UPK1AO00322 MIR7853-201ENST00000584820 132 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC010503.3-201ENST00000594355 540 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1AO00322 AC018690.1-201ENST00000608144 626 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC016590.3-201ENST00000611171 753 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC026367.3-201ENST00000619032 590 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
UPK1AO00322 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1AO00322 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
UPK1AO00322 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1AO00322 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1AO00322 OR9K1P-202ENST00000641111 3217 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1AO00322 AL359715.3-201ENST00000569267 2123 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
UPK1AO00322 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
UPK1AO00322 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
UPK1AO00322 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
UPK1AO00322 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1AO00322 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
UPK1AO00322 AL358178.1-201ENST00000407698 397 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.27□□□□□ -1.57
UPK1AO00322 SLC20A1P1-201ENST00000413906 956 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.27□□□□□ -1.57
UPK1AO00322 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1AO00322 NDUFA5P5-201ENST00000468361 342 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.27□□□□□ -1.57
UPK1AO00322 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1AO00322 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.27□□□□□ -1.57
UPK1AO00322 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1AO00322 MRPS16P1-201ENST00000523462 412 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.27□□□□□ -1.57
UPK1AO00322 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.27□□□□□ -1.57
UPK1AO00322 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.27□□□□□ -1.57
UPK1AO00322 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1AO00322 AC005726.4-201ENST00000582858 458 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1AO00322 AP005431.1-201ENST00000618479 319 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 AL359742.1-201ENST00000622497 540 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 AC011755.1-201ENST00000623763 2049 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1AO00322 AC087565.3-203ENST00000641018 837 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
UPK1AO00322 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1AO00322 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
UPK1AO00322 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 AC079097.1-201ENST00000512187 1399 ntBASIC5.27□□□□□ -1.57
UPK1AO00322 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
UPK1AO00322 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1AO00322 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
UPK1AO00322 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1AO00322 AC073136.1-201ENST00000449426 2884 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.26□□□□□ -1.57
UPK1AO00322 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
UPK1AO00322 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
UPK1AO00322 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC106872.5-201ENST00000508856 1416 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 GAPDHP24-201ENST00000328713 983 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 RNA5SP394-201ENST00000364216 119 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 HMGB1P20-201ENST00000402555 677 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 HMGN1P20-201ENST00000411849 300 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1AO00322 NANOGP9-201ENST00000439890 892 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1AO00322 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC021106.1-201ENST00000509020 1058 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 AC091912.1-201ENST00000511351 248 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 AC021193.1-201ENST00000511607 420 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms