Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 SNORA17A-201ENST00000391185 133 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 DPPA2P2-201ENST00000418220 897 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC093155.2-201ENST00000420734 937 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AL022331.1-201ENST00000429025 477 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 BX679664.2-201ENST00000439282 283 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC064862.4-201ENST00000442180 334 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 NXT1P1-201ENST00000458481 316 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 NPM1P21-201ENST00000513394 762 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC021678.3-201ENST00000517893 476 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC096996.1-201ENST00000563813 325 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC005520.3-201ENST00000602874 370 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AL133445.2-201ENST00000611191 527 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC107905.1-201ENST00000616204 426 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC243960.7-201ENST00000623532 707 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 SNORA17.5-201ENST00000630429 132 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC117409.1-201ENST00000470499 1310 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC007842.1-201ENST00000597336 2039 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 MFSD8-239ENST00000641590 2479 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 OR13C1P-202ENST00000641378 2919 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AL159987.1-201ENST00000347911 293 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 RNA5SP435-201ENST00000364044 108 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 FRG2FP-204ENST00000453982 852 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC012123.2-201ENST00000485809 248 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC105384.2-201ENST00000508433 640 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC109481.1-201ENST00000509173 282 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 HMGB1P42-201ENST00000532126 553 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AL121594.2-201ENST00000541658 472 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 DPPA2P4-201ENST00000563717 878 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 RN7SL787P-201ENST00000613000 284 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC126175.1-201ENST00000617041 758 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 AC239868.2-201ENST00000564237 4527 ntBASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX9Q9Y5X1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 MIPEPP2-201ENST00000422560 1819 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 SNORA64.1-201ENST00000362600 132 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 RN7SKP69-201ENST00000365390 305 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 RPS26P38-201ENST00000414476 348 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 NIFKP3-201ENST00000417799 865 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 RPL34P3-201ENST00000421454 338 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms