Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC092111.2-201ENST00000611627 1414 ntBASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 BIN2P1-201ENST00000504996 1530 ntBASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHB1Q9Y5F3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 COX6B1P3-201ENST00000312310 260 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 RNU6-252P-201ENST00000363232 107 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 LCN1P2-201ENST00000372030 223 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AK3P5-201ENST00000432033 519 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 FABP5P3-201ENST00000437960 408 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AL391987.1-201ENST00000441025 200 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 ELOCP13-201ENST00000443934 329 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 MTND6P5-201ENST00000448266 512 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC092967.1-201ENST00000449016 481 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 VPS25P1-201ENST00000455691 508 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AL139824.2-201ENST00000458731 1095 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC068228.1-201ENST00000461723 211 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 RN7SL714P-201ENST00000487050 298 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 HMGB1P38-201ENST00000490557 577 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 PRELID3BP5-201ENST00000508612 460 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 RFPL4AP3-201ENST00000515267 345 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 OR5D2P-201ENST00000524390 911 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AP001804.2-201ENST00000533932 910 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 OR8K4P-201ENST00000534608 872 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AGGF1P5-201ENST00000567900 919 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC098935.2-201ENST00000604222 466 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 MIR7159-201ENST00000620587 66 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AC092159.4-201ENST00000624944 550 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 AKAP17BP-201ENST00000431706 2719 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 LYARP1-201ENST00000436977 1501 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHB1Q9Y5F3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AL136984.1-201ENST00000607611 1893 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 OLMALINC-203ENST00000641087 3779 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 RNU6-207P-201ENST00000384137 107 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 RPL21P50-201ENST00000417698 477 ntBASIC6.28□□□□□ -1.4
PCDHB1Q9Y5F3 AC008173.1-201ENST00000418901 264 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms