Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL589993.1-201ENST00000407450 2524 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 MIR765-201ENST00000390226 114 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 AL133270.1-201ENST00000402635 279 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 RN7SKP126-201ENST00000411143 300 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 AC092647.2-201ENST00000452998 253 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 AL671862.1-201ENST00000515851 349 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 AP001922.4-201ENST00000526967 290 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 AC092747.4-201ENST00000620519 1861 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.01□□□□□ -1.29
SCN11AQ9UI33 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SCN11AQ9UI33 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 RNU4-4P-201ENST00000364588 130 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7□□□□□ -1.29
SCN11AQ9UI33 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 RPS26P13-201ENST00000419030 330 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7□□□□□ -1.29
SCN11AQ9UI33 RPL7P61-201ENST00000451721 751 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AL645937.3-201ENST00000453647 936 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 SNORD125-201ENST00000459538 96 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 RPS18P6-201ENST00000476880 458 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AC013701.1-201ENST00000522657 465 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AP004607.2-201ENST00000533949 322 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7□□□□□ -1.29
SCN11AQ9UI33 AC060780.2-201ENST00000589047 198 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SCN11AQ9UI33 AC087385.3-201ENST00000620477 187 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7□□□□□ -1.29
SCN11AQ9UI33 LRRC37A9P-201ENST00000603850 5376 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 AC023421.1-201ENST00000590535 1785 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
SCN11AQ9UI33 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC7□□□□□ -1.29
SCN11AQ9UI33 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7□□□□□ -1.29
SCN11AQ9UI33 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7□□□□□ -1.29
SCN11AQ9UI33 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7□□□□□ -1.29
SCN11AQ9UI33 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7□□□□□ -1.29
SCN11AQ9UI33 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 SNURFL-201ENST00000309296 343 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7□□□□□ -1.29
SCN11AQ9UI33 AC211486.3-201ENST00000412694 621 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 PA2G4P6-201ENST00000438325 1197 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 RN7SL188P-201ENST00000469842 285 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AC092754.1-201ENST00000472975 479 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7□□□□□ -1.29
SCN11AQ9UI33 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7□□□□□ -1.29
SCN11AQ9UI33 AC133644.2-201ENST00000608142 540 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AP005432.2-201ENST00000608162 586 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AC016251.2-201ENST00000623393 3089 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 AL008638.3-201ENST00000623027 5182 ntBASIC7□□□□□ -1.29
SCN11AQ9UI33 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN11AQ9UI33 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AL451142.1-201ENST00000375867 775 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AL807761.1-201ENST00000417622 171 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 RN7SL423P-201ENST00000486202 304 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 GTF2F2P1-201ENST00000511083 675 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 EIF3KP3-201ENST00000514461 639 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 GAPDHP62-201ENST00000515313 990 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AC122688.1-201ENST00000541494 223 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AC074050.1-201ENST00000563247 211 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AC091953.3-201ENST00000623220 236 ntBASIC6.99□□□□□ -1.29
SCN11AQ9UI33 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN11AQ9UI33 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms