Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AL121776.1-201ENST00000429337 372 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 LRRC37A14P-201ENST00000452297 462 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 RN7SL72P-201ENST00000460697 269 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC022336.1-201ENST00000475510 337 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 RNU6-615P-201ENST00000516065 106 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 RNU6-889P-201ENST00000517189 103 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC096996.1-201ENST00000563813 325 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 MIR4489-201ENST00000578869 62 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 MIR4505-201ENST00000582238 73 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 FO393422.1-201ENST00000603908 708 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 AL589674.2-201ENST00000604304 337 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC120053.1-201ENST00000607706 736 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL20A1Q9P218 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL20A1Q9P218 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL20A1Q9P218 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 IMMTP1-201ENST00000435590 2219 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 FBXL21-201ENST00000297158 1305 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AC079753.1-201ENST00000623243 3868 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 SNORD51.1-201ENST00000365405 77 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 ST13P16-201ENST00000401760 781 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 Z84478.1-201ENST00000438230 1219 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 RPL17P2-201ENST00000491913 451 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 AL136038.1-201ENST00000497246 351 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 HMGN1P15-201ENST00000513870 295 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 AC021678.3-201ENST00000517893 476 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 CKS1BP1-201ENST00000555221 240 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 AC093510.2-201ENST00000562820 896 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 MIR3176-201ENST00000582210 90 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 CU639417.4-201ENST00000623928 207 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 WBP11P1-201ENST00000562560 1931 ntBASIC6.6□□□□□ -1.35
COL20A1Q9P218 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL20A1Q9P218 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.6□□□□□ -1.35
COL20A1Q9P218 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms