Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 AC007842.1-201ENST00000597336 2039 ntBASIC5.28□□□□□ -1.56
VAPAQ9P0L0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VAPAQ9P0L0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 MAPK10-338ENST00000641647 3362 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 RNA5SP187-201ENST00000384400 119 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 BX119904.3-201ENST00000428194 957 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 CBX1P2-201ENST00000453841 458 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 DEFB109A-201ENST00000482450 265 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 RBBP4P1-201ENST00000502424 1276 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC021193.1-201ENST00000511607 420 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 HSD3BP3-201ENST00000514706 994 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC019322.1-201ENST00000571869 389 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC107993.1-201ENST00000591343 684 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC063977.5-201ENST00000601044 974 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AP001437.1-201ENST00000608783 456 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AC100757.1-201ENST00000616872 1835 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.27□□□□□ -1.57
VAPAQ9P0L0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.27□□□□□ -1.57
VAPAQ9P0L0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 PPIAP9-201ENST00000403866 498 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AL009179.1-201ENST00000406085 265 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AL359885.1-201ENST00000415786 903 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 NDUFS5P5-201ENST00000437256 321 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC130364.2-201ENST00000528639 604 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC027026.1-201ENST00000532323 742 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC008507.3-201ENST00000585753 472 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 FAM27E4-201ENST00000605259 342 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 HTR1DP1-201ENST00000616500 888 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC073869.7-201ENST00000640874 297 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 AP005432.1-201ENST00000580891 3485 ntBASIC5.26□□□□□ -1.57
VAPAQ9P0L0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VAPAQ9P0L0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms