Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 MT-RNR2-201ENST00000387347 1559 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 AP001284.1-201ENST00000528393 2118 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 RPS2P45-201ENST00000469997 2057 ntBASIC5.57□□□□□ -1.52
TREX1Q9NSU2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TREX1Q9NSU2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC092681.1-201ENST00000297369 291 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 RMRPP5-201ENST00000411156 267 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 RNU2-18P-201ENST00000411224 162 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 HMGN1P20-201ENST00000411849 300 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC009784.1-201ENST00000426484 460 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AP001496.3-201ENST00000580230 913 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC010632.3-201ENST00000611377 369 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AL031658.2-201ENST00000616850 651 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AL359742.1-201ENST00000622497 540 ntBASIC5.56□□□□□ -1.52
TREX1Q9NSU2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.56□□□□□ -1.52
TREX1Q9NSU2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AC020633.1-201ENST00000468439 2247 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AL354766.1-201ENST00000423396 542 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AL662874.1-201ENST00000426065 230 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 RPL5P2-201ENST00000429598 854 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 VDAC2P4-201ENST00000452925 711 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AL358876.1-201ENST00000453364 1075 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AP000547.1-201ENST00000454360 617 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 PSAT1P4-201ENST00000466500 526 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AC079600.1-201ENST00000550326 297 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 IGBP1P1-201ENST00000554337 1009 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AL162574.1-201ENST00000615702 950 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 MIR193BHG-214ENST00000641765 509 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AC008691.1-209ENST00000642094 814 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TREX1Q9NSU2 AC091305.2-201ENST00000624049 1576 ntBASIC5.55□□□□□ -1.52
TREX1Q9NSU2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TREX1Q9NSU2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms