Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC090220.1-201ENST00000593078 1699 ntBASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LRTM1Q9HBL6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 NLRP3P1-201ENST00000622303 1785 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC023632.6-201ENST00000624338 2177 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RARSP1-201ENST00000542842 1418 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 PWAR1-201ENST00000624188 2414 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RNA5SP510-201ENST00000364697 99 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RN7SKP69-201ENST00000365390 305 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RN7SKP81-201ENST00000365603 331 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RPS6P23-201ENST00000413224 722 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AL133482.1-201ENST00000415988 498 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AK4P4-201ENST00000419465 646 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 PCBP2P1-201ENST00000437262 977 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 NPM1P19-201ENST00000450070 712 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 COX6B1P2-201ENST00000489624 230 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RN7SL101P-201ENST00000496350 279 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RN7SKP253-201ENST00000516424 309 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RNA5SP438-201ENST00000516561 112 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 PMS2P3-207ENST00000529061 717 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AL139124.1-201ENST00000609123 421 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC024884.1-201ENST00000620583 399 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC005261.2-201ENST00000593427 4258 ntBASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRTM1Q9HBL6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 TMSB4XP2-201ENST00000335179 210 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 RNA5SP273-201ENST00000362484 113 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AL512422.1-201ENST00000407033 553 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 HMGN1P20-201ENST00000411849 300 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 PSAT1P4-201ENST00000466500 526 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 RPS17P15-201ENST00000475609 349 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 Y_RNA.667-201ENST00000516212 107 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AC051619.2-201ENST00000559063 397 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 MIR4311-201ENST00000580794 100 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AL583832.1-201ENST00000603227 784 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 MIR6798-201ENST00000612887 67 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 MIR6886-201ENST00000619864 61 ntBASIC5.41□□□□□ -1.54
LRTM1Q9HBL6 AC021766.1-201ENST00000624404 741 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms